RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 ARHGEF16Q5VV41 709 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 HGSNATQ68CP4 663 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 XRRA1Q6P2D8 792 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 CEP112Q8N8E3 955 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 COL11A1P12107 1806 aaPredicted RBP20.99■□□□□ 0.95
ERCC2-203ENST00000391944 CLIC2O15247 247 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 EPB41P11171 864 aaKnown RBP20.99■□□□□ 0.95
ERCC2-203ENST00000391944 POLR2FP61218 127 aaKnown RBP20.99■□□□□ 0.95
ERCC2-203ENST00000391944 KIF5AQ12840 1032 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 MAPK7Q13164 816 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 BAATQ14032 418 aaPredicted RBP20.99■□□□□ 0.95
ERCC2-203ENST00000391944 COG2Q14746 738 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 ASTE1Q2TB18 679 aaPredicted RBP20.99■□□□□ 0.95
ERCC2-203ENST00000391944 ODR4Q5SWX8 454 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 PADI6Q6TGC4 694 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 PURBQ96QR8 312 aaKnown RBP20.99■□□□□ 0.95
ERCC2-203ENST00000391944 TSGA10Q9BZW7 698 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 DEF6Q9H4E7 631 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 SAMM50Q9Y512 469 aa20.99■□□□□ 0.95
ERCC2-203ENST00000391944 UTRNP46939 3433 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 AKR1B10O60218 316 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 CASP4P49662 377 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 AMPD2Q01433 879 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 SFMBT2Q5VUG0 894 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 DAW1Q8N136 415 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 GANQ9H2C0 597 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 ZNF214Q9UL59 606 aaPredicted RBP20.98■□□□□ 0.95
ERCC2-203ENST00000391944 PCDHB13Q9Y5F0 798 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 PCDHA13Q9Y5I0 950 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 DICER1Q9UPY3 1922 aaKnown RBP20.98■□□□□ 0.95
ERCC2-203ENST00000391944 HIP1RO75146 1068 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 LMNB1P20700 586 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 NOL9Q5SY16 702 aaKnown RBP20.98■□□□□ 0.95
ERCC2-203ENST00000391944 BORCS6Q96GS4 357 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 STRA6Q9BX79 667 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 PLCB1Q9NQ66 1216 aa20.98■□□□□ 0.95
ERCC2-203ENST00000391944 ATP9AO75110 1047 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 SUPT20HL1Q3ZLR7 823 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 SLC9C1Q4G0N8 1177 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 SNRNP48Q6IEG0 339 aaKnown RBP20.97■□□□□ 0.95
ERCC2-203ENST00000391944 CATSPERGQ6ZRH7 1159 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 VSIG10LQ86VR7 867 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 GPR161Q8N6U8 529 aaKnown RBP20.97■□□□□ 0.95
ERCC2-203ENST00000391944 RABGGTAQ92696 567 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 GOLGA1Q92805 767 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 IFIH1Q9BYX4 1025 aaKnown RBP20.97■□□□□ 0.95
ERCC2-203ENST00000391944 MYO6Q9UM54 1294 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 SSC5DA1L4H1 1573 aa20.97■□□□□ 0.95
ERCC2-203ENST00000391944 ATP2A1O14983 1001 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 TLR2O60603 784 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 USO1O60763 962 aaKnown RBP20.96■□□□□ 0.95
ERCC2-203ENST00000391944 SERPING1P05155 500 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 RARRES1P49788 294 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 WHAMMP3Q1A5X7 153 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 DPY19L2P1Q6NXN4 242 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 SLC35C1Q96A29 364 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 DUSP10Q9Y6W6 482 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 PSMC2P35998 433 aaKnown RBP20.96■□□□□ 0.95
ERCC2-203ENST00000391944 CHMP4BP1P59074 171 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 APBA1Q02410 837 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 HS2ST1Q7LGA3 356 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 ARID3AQ99856 593 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 MKNK1Q9BUB5 465 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 IKZF4Q9H2S9 585 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 AIPL1Q9NZN9 384 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 AFG3L2Q9Y4W6 797 aa20.96■□□□□ 0.95
ERCC2-203ENST00000391944 PPP1R37O75864 691 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 JAK3P52333 1124 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 TMEM132BQ14DG7 1078 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 EXOC3L4Q17RC7 722 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 TEX35Q5T0J7 233 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 C4orf19Q8IY42 314 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 GBP3Q9H0R5 595 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 DMAC2Q9NW81 257 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 TMOD4Q9NZQ9 345 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 POLR2AP24928 1970 aaKnown RBP20.95■□□□□ 0.94
ERCC2-203ENST00000391944 TESPA1A2RU30 521 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-203ENST00000391944 NR3C2P08235 984 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 MAPTP10636 758 aaKnown RBP20.95■□□□□ 0.94
ERCC2-203ENST00000391944 SLC9A1P19634 815 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 CCND2P30279 289 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 SFNP31947 248 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 TUBB4BP68371 445 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 KRT76Q01546 638 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 DCAF17Q5H9S7 520 aaPredicted RBP20.95■□□□□ 0.94
ERCC2-203ENST00000391944 KSR1Q8IVT5 923 aa20.95■□□□□ 0.94
ERCC2-203ENST00000391944 LARSQ9P2J5 1176 aaKnown RBP20.95■□□□□ 0.94
ERCC2-203ENST00000391944 MAFGO15525 162 aa20.94■□□□□ 0.94
ERCC2-203ENST00000391944 PON1P27169 355 aa20.94■□□□□ 0.94
ERCC2-203ENST00000391944 PAPD7Q5XG87 772 aaKnown RBP20.94■□□□□ 0.94
ERCC2-203ENST00000391944 TRAPPC11Q7Z392 1133 aa20.94■□□□□ 0.94
ERCC2-203ENST00000391944 FAM186BQ8IYM0 893 aa20.94■□□□□ 0.94
ERCC2-203ENST00000391944 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.94■□□□□ 0.941e-6■■■□□ 17.2
ERCC2-203ENST00000391944 GOLGA5Q8TBA6 731 aa20.94■□□□□ 0.94
ERCC2-203ENST00000391944 SECISBP2LQ93073 1101 aaKnown RBP20.94■□□□□ 0.94
ERCC2-203ENST00000391944 AGPAT3Q9NRZ7 376 aa20.94■□□□□ 0.94
ERCC2-203ENST00000391944 PUF60Q9UHX1 559 aaKnown RBP20.94■□□□□ 0.94
ERCC2-203ENST00000391944 GTPBP10A4D1E9 387 aaKnown RBP20.94■□□□□ 0.94
ERCC2-203ENST00000391944 WDR64B1ANS9 1081 aa20.94■□□□□ 0.94
ERCC2-203ENST00000391944 RBAK-RBAKDNI3L0D1 243 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms