RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 MAF1Q9H063 256 aa9.66□□□□□ -0.86
TRAV17-201ENST00000390445 LSG1Q9H089 658 aaKnown RBP9.66□□□□□ -0.86
TRAV17-201ENST00000390445 HDAC6Q9UBN7 1215 aa9.66□□□□□ -0.86
TRAV17-201ENST00000390445 SERTAD1Q9UHV2 236 aa9.66□□□□□ -0.86
TRAV17-201ENST00000390445 TELO2Q9Y4R8 837 aa9.66□□□□□ -0.86
TRAV17-201ENST00000390445 XIRP2A4UGR9 3374 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 PNMA6FA0A0J9YX94 578 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 GCOM1H8Y6P7 765 aaPredicted RBP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 RFXAPO00287 272 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 PRC1O43663 620 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 PLEKHA8P1O95397 391 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 GGPS1O95749 300 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 POLR2MP0CAP2 368 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 ATP2A2P16615 1042 aaKnown RBP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 UBA1P22314 1058 aaKnown RBP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 IGFBP4P22692 258 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 MRPS9P82933 396 aaKnown RBP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 BFSP2Q13515 415 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 ELOAQ14241 798 aaKnown RBP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 SART3Q15020 963 aaKnown RBP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 KIAA0753Q2KHM9 967 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 HSDL1Q3SXM5 330 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 SPRED2Q7Z698 418 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 CATIPQ7Z7H3 387 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 VSIG10LQ86VR7 867 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 SESTD1Q86VW0 696 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 RETREG2Q8NC44 543 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 PPTC7Q8NI37 304 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 GAS2L1Q99501 681 aaPredicted RBP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 ESYT1Q9BSJ8 1104 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRAV17-201ENST00000390445 CERS4Q9HA82 394 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 SLC28A3Q9HAS3 691 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 GTF2IRD1Q9UHL9 959 aa9.65□□□□□ -0.86
TRAV17-201ENST00000390445 hCG_1642624A0A1W2PR95 340 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 EPOPA6NHQ4 379 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 HAS3O00219 553 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 SH2B2O14492 632 aaPredicted RBP9.64□□□□□ -0.87
TRAV17-201ENST00000390445 SLC27A2O14975 620 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 F2P00734 622 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 CA3P07451 260 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 PFKMP08237 780 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 CCND2P30279 289 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 LAMC2Q13753 1193 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 CELF3Q5SZQ8 465 aaKnown RBP9.64□□□□□ -0.87
TRAV17-201ENST00000390445 TMEM164Q5U3C3 297 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 USP17L6PQ6QN14 398 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 CASC1Q6TDU7 716 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 C7orf31Q8N865 590 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 SPATA33Q96N06 139 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 MAP3K20Q9NYL2 800 aaKnown RBP9.64□□□□□ -0.87
TRAV17-201ENST00000390445 RTEL1Q9NZ71 1219 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 PCDHA11Q9Y5I1 949 aa9.64□□□□□ -0.87
TRAV17-201ENST00000390445 TTC3P53804 2025 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 FRMPD4Q14CM0 1322 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 NBNO60934 754 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 DDAH1O94760 285 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 CKBP12277 381 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 ACTN1P12814 892 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 HOXD8P13378 290 aaPredicted RBP9.63□□□□□ -0.87
TRAV17-201ENST00000390445 RFC2P35250 354 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 SEC13P55735 322 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 DEFB103AP81534 67 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 ZNF618Q5T7W0 954 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 CREB3L3Q68CJ9 461 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 NFXL1Q6ZNB6 911 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 LRRC8DQ7L1W4 858 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 MICALL1Q8N3F8 863 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 SRBD1Q8N5C6 995 aaKnown RBP9.63□□□□□ -0.87
TRAV17-201ENST00000390445 SAMD3Q8N6K7 520 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 TSEN2Q8NCE0 465 aaKnown RBP9.63□□□□□ -0.87
TRAV17-201ENST00000390445 CTCFLQ8NI51 663 aaPredicted RBP9.63□□□□□ -0.87
TRAV17-201ENST00000390445 CAGE1Q8TC20 777 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 AFAP1L1Q8TED9 768 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 TCEANC2Q96MN5 208 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 C16orf70Q9BSU1 422 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 KATNAL1Q9BW62 490 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 SPZ1Q9BXG8 430 aa9.63□□□□□ -0.87
TRAV17-201ENST00000390445 POLMQ9NP87 494 aaPredicted RBP9.63□□□□□ -0.87
TRAV17-201ENST00000390445 FNDC1Q4ZHG4 1894 aaPredicted RBP9.63□□□□□ -0.87
TRAV17-201ENST00000390445 LCHNA4D1U4 455 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 CARNS1A5YM72 827 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 CCDC69A6NI79 296 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 MEIS2O14770 477 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 LGR5O75473 907 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 LGALS2P05162 132 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 SELPP16109 830 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 MCM5P33992 734 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 WDR5P61964 334 aaKnown RBP9.62□□□□□ -0.87
TRAV17-201ENST00000390445 SP4Q02446 784 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 CENPCQ03188 943 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 MBTPS1Q14703 1052 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 NECTIN1Q15223 517 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 UBE2SQ16763 222 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 TRIM71Q2Q1W2 868 aaKnown RBP9.62□□□□□ -0.87
TRAV17-201ENST00000390445 KRT40Q6A162 431 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 CYFIP1Q7L576 1253 aa9.62□□□□□ -0.87
TRAV17-201ENST00000390445 HERC6Q8IVU3 1022 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms