RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 SH2D4AQ9H788 454 aa13.25□□□□□ -0.29
CAPRIN1-202ENST00000389645 RAB21Q9UL25 225 aa13.25□□□□□ -0.29
CAPRIN1-202ENST00000389645 SNX12Q9UMY4 172 aa13.25□□□□□ -0.29
CAPRIN1-202ENST00000389645 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 PALMO75781 387 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 FAM13AO94988 1023 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 USP8P40818 1118 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 PPP1R18Q6NYC8 613 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 SPATA4Q8NEY3 305 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 CCDC43Q96MW1 224 aaKnown RBP13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 SAMM50Q9Y512 469 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 COL2A1P02458 1487 aaPredicted RBP13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 TUBBP07437 444 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 SLC9A1P19634 815 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 KCTD16Q68DU8 428 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 PDXDC1Q6P996 788 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 AFAP1L1Q8TED9 768 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 NCAPGQ9BPX3 1015 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 PACSIN1Q9BY11 444 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 SIK3Q9Y2K2 1263 aa13.24□□□□□ -0.29
CAPRIN1-202ENST00000389645 MAP2K7O14733 419 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 DDNO94850 711 aaPredicted RBP13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 XRCC5P13010 732 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 FECHP22830 423 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 CASP5P51878 434 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 SH2D3AQ9BRG2 576 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 IKZF4Q9H2S9 585 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 SPON1Q9HCB6 807 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 SALL4Q9UJQ4 1053 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 KCNK3O14649 394 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 CYP2J2P51589 502 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 HIRAP54198 1017 aaPredicted RBP13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 GUCY2DQ02846 1103 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 TNFAIP1Q13829 316 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 PAPD7Q5XG87 772 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 BTNL9Q6UXG8 535 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 LRRC55Q6ZSA7 311 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 CATSPER3Q86XQ3 398 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 SYCP3Q8IZU3 236 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 HNRNPLLQ8WVV9 542 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 KRT12Q99456 494 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 MYH7BA7E2Y1 1941 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 CEP104O60308 925 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 MYBP10242 640 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 TCP1P17987 556 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 CYP11B2P19099 503 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 ABCB4P21439 1286 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 PPP4R3AQ6IN85 833 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 FAM43BQ6ZT52 329 aaPredicted RBP13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 CPXCR1Q8N123 301 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 SCFD1Q8WVM8 642 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 EXOC4Q96A65 974 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 DNAJC19Q96DA6 116 aa13.23□□□□□ -0.29
CAPRIN1-202ENST00000389645 GOLGA6CA6NDK9 693 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 GOLGA6DP0CG33 693 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 KLRC1P26715 233 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 PSMD2Q13200 908 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 EXOC3L4Q17RC7 722 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 CFAP221Q4G0U5 840 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 ADAT2Q7Z6V5 191 aaKnown RBP13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 PACS2Q86VP3 889 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 FAM71BQ8TC56 605 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 GOLGA6AQ9NYA3 693 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 A0A087X0T9 212 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 ZSCAN5CA6NGD5 496 aaPredicted RBP13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 FAM228BP0C875 321 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 MAP3K10Q02779 954 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 KCNMA1Q12791 1236 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 RPGRIP1Q96KN7 1286 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 REEP2Q9BRK0 252 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 FAM107BQ9H098 131 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 RBM12Q9NTZ6 932 aaKnown RBP13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 GGA3Q9NZ52 723 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 LTBP3Q9NS15 1303 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 ZBTB39O15060 712 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 KCNA1Q09470 495 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 SPP2Q13103 211 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 ARHGAP44Q17R89 818 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 GJB7Q6PEY0 223 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 MAATS1Q7Z4T9 603 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 EPB41L5Q9HCM4 733 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 TCEAL9Q9UHQ7 104 aa13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 RRP15Q9Y3B9 282 aaKnown RBP13.22□□□□□ -0.29
CAPRIN1-202ENST00000389645 ANO9A1A5B4 782 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 ZEB2O60315 1214 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 ACTN2P35609 894 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 ATP1A2P50993 1020 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 SF3A3Q12874 501 aaKnown RBP eCLIP13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 MTMR2Q13614 643 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 NAA35Q5VZE5 725 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 CHURC1Q8WUH1 139 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 TRIM31Q9BZY9 425 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 GPRC5DQ9NZD1 345 aa13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
CAPRIN1-202ENST00000389645 RABGAP1Q9Y3P9 1069 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms