RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 ZNF384Q8TF68 577 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 NAF1Q96HR8 494 aaKnown RBP14.6□□□□□ -0.07
CCDC57-202ENST00000389641 PABPC3Q9H361 631 aaKnown RBP14.6□□□□□ -0.07
CCDC57-202ENST00000389641 TMEM260Q9NX78 707 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 ZFATQ9P243 1243 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 EP400Q96L91 3159 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 MYH4Q9Y623 1939 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 CCDC188H7C350 402 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 PECAM1P16284 738 aaPredicted RBP14.6□□□□□ -0.07
CCDC57-202ENST00000389641 ABCB4P21439 1286 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 EIF3BP55884 814 aaKnown RBP14.6□□□□□ -0.07
CCDC57-202ENST00000389641 RWDD2BP57060 319 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 ICA1Q05084 483 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 TBCKQ8TEA7 893 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 EDEM3Q9BZQ6 932 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 NUCKS1Q9H1E3 243 aaKnown RBP14.6□□□□□ -0.07
CCDC57-202ENST00000389641 DAAM1Q9Y4D1 1078 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 USP15Q9Y4E8 981 aaPredicted RBP14.6□□□□□ -0.07
CCDC57-202ENST00000389641 GLI3P10071 1580 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 CCDC169A6NNP5 214 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 STXBP3O00186 592 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 ALADP13716 330 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 ATP11AP98196 1134 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 PSMD2Q13200 908 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 NBPF20Q3BBV1 942 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 GJB7Q6PEY0 223 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 IRF2BP2Q7Z5L9 587 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 U2AF1L4Q8WU68 220 aaKnown RBP14.6□□□□□ -0.07
CCDC57-202ENST00000389641 DYNLL2Q96FJ2 89 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 AK8Q96MA6 479 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 SLITRK6Q9H5Y7 841 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 MAGEF1Q9HAY2 307 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 STX8Q9UNK0 236 aa14.6□□□□□ -0.07
CCDC57-202ENST00000389641 NPHP3-ACAD11A0A0J9YXS1 232 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 H0Y3Z8 333 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 ZBTB48P10074 688 aaPredicted RBP14.59□□□□□ -0.07
CCDC57-202ENST00000389641 PCK1P35558 622 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 RAB27AP51159 221 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 LACTBP83111 547 aaPredicted RBP14.59□□□□□ -0.07
CCDC57-202ENST00000389641 SLC30A9Q6PML9 568 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 SYN2Q92777 582 aaPredicted RBP14.59□□□□□ -0.07
CCDC57-202ENST00000389641 RMDN2Q96LZ7 410 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 KCNK9Q9NPC2 374 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 COL18A1P39060 1754 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 PRPHP41219 470 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 KCNH2Q12809 1159 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 CNGA2Q16280 664 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 CNKSR1Q969H4 720 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 TSC22D3Q99576 134 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 NSRP1Q9H0G5 558 aaKnown RBP14.59□□□□□ -0.07
CCDC57-202ENST00000389641 AIPL1Q9NZN9 384 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 PPP1R9AQ9ULJ8 1098 aa14.59□□□□□ -0.07
CCDC57-202ENST00000389641 SMCO2A6NFE2 343 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 ERVV-2B6SEH9 535 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 BHMG1C9JSJ3 638 aaPredicted RBP14.58□□□□□ -0.07
CCDC57-202ENST00000389641 USP17L8P0C7I0 530 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 PDE6CP51160 858 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 NONOQ15233 471 aaKnown RBP eCLIP14.58□□□□□ -0.076e-7■■■□□ 15.6
CCDC57-202ENST00000389641 LONRF1Q17RB8 773 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 NT5DC3Q86UY8 548 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 SNX29Q8TEQ0 813 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 ERP44Q9BS26 406 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 TXLNGYQ9BZA5 131 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 IL17RBQ9NRM6 502 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 ZDHHC18Q9NUE0 388 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 TMOD4Q9NZQ9 345 aa14.58□□□□□ -0.07
CCDC57-202ENST00000389641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.58□□□□□ -0.072e-6■■■■□ 24.4
CCDC57-202ENST00000389641 MXRA7P84157 204 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 POU5F1Q01860 360 aaKnown RBP14.58□□□□□ -0.08
CCDC57-202ENST00000389641 CHRNDQ07001 517 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 BNIP1Q12981 228 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 ECM1Q16610 540 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 NEK8Q86SG6 692 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.08
CCDC57-202ENST00000389641 C18orf8Q96DM3 657 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 RAB17Q9H0T7 212 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 GANQ9H2C0 597 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 ETNK1Q9HBU6 452 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 PAPOLBQ9NRJ5 636 aaKnown RBP14.58□□□□□ -0.08
CCDC57-202ENST00000389641 BARHL2Q9NY43 387 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 A0A1B0GVG6 124 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 A6NHS1 94 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 LAD1O00515 517 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 GH1P01241 217 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 KLRC3Q07444 240 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 ADAM9Q13443 819 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 IFI16Q16666 785 aaKnown RBP14.58□□□□□ -0.08
CCDC57-202ENST00000389641 DCAF12L1Q5VU92 463 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 SEPT14Q6ZU15 432 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 PGM2Q96G03 612 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 DCP1AQ9NPI6 582 aaPredicted RBP14.58□□□□□ -0.08
CCDC57-202ENST00000389641 HOMER3Q9NSC5 361 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 MCM9Q9NXL9 1143 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 TMOD3Q9NYL9 352 aa14.58□□□□□ -0.08
CCDC57-202ENST00000389641 PVALEFA0A1B0GWK0 134 aa14.57□□□□□ -0.08
CCDC57-202ENST00000389641 CES2O00748 559 aa14.57□□□□□ -0.08
CCDC57-202ENST00000389641 RASGRF2O14827 1237 aa14.57□□□□□ -0.08
CCDC57-202ENST00000389641 SUN1O94901 812 aa14.57□□□□□ -0.08
CCDC57-202ENST00000389641 H2AFZP0C0S5 128 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms