RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 APOA5Q6Q788 366 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 RFX8Q6ZV50 586 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 DHX40Q8IX18 779 aaKnown RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 PDP2Q9P2J9 529 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 ADGRL2O95490 1459 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 KPNA7A9QM74 516 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 PYGLP06737 847 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 LLGL1Q15334 1064 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 DNAJC24Q6P3W2 148 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 TRPM8Q7Z2W7 1104 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 SERPINB4P48594 390 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 YWHAHQ04917 246 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 ODR4Q5SWX8 454 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 UBE2TQ9NPD8 197 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 LONP2Q86WA8 852 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 CYP4F11Q9HBI6 524 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 SNX24Q9Y343 169 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 USP15Q9Y4E8 981 aaPredicted RBP13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 HLA-DPA1P20036 260 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 ZNF790Q6PG37 636 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 CATSPER3Q86XQ3 398 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 EDC3Q96F86 508 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 PGBD1Q96JS3 809 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 EYA1Q99502 592 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 EPC1Q9H2F5 836 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 COG4Q9H9E3 785 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 DLGAP2Q9P1A6 1054 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 PCDHA4Q9UN74 947 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 MAST3O60307 1309 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 QRICH2Q9H0J4 1663 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 ATP6V1E1P36543 226 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 COPS2P61201 443 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 CCDC144BQ3MJ40 725 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 HIC2Q96JB3 615 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 CALN1Q9BXU9 219 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.28
SRGAP3-202ENST00000383836 AARSP49588 968 aaKnown RBP eCLIP13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 ALKBH5Q6P6C2 394 aaKnown RBP13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 MYLK4Q86YV6 388 aaPredicted RBP13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 SLC40A1Q9NP59 571 aa13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 TMEM191BP0C7N4 346 aa13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 HDAC6Q9UBN7 1215 aa13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 PNMA1Q8ND90 353 aa13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 SMCR8Q8TEV9 937 aaPredicted RBP13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 DHX38Q92620 1227 aaKnown RBP13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 MTBPQ96DY7 904 aa13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 HOOK2Q96ED9 719 aa13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 DIABLOQ9NR28 239 aa13.27□□□□□ -0.29
SRGAP3-202ENST00000383836 CCDC195A0A1B0GUA6 201 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 CCNE1P24864 410 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 DEFA1P59665 94 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 DEFA3P59666 94 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 GINS2Q9Y248 185 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 WDR7Q9Y4E6 1490 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 IL10P22301 178 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 KRT26Q7Z3Y9 468 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 ZBTB18Q99592 522 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 VSNL1P62760 191 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 TEX12Q9BXU0 123 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 CEP72Q9P209 647 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 HPCAL4Q9UM19 191 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 LGALS16A8MUM7 142 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 TAF5LO75529 589 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 PLD3Q8IV08 490 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 SLITRK6Q9H5Y7 841 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 ADAMTS1Q9UHI8 967 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 KLRF2D3W0D1 207 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 KCNJ6P48051 423 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 LRRC14Q15048 493 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 ZBTB8OSQ8IWT0 167 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 DTX3LQ8TDB6 740 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 ZNF518AQ6AHZ1 1483 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 MED7O43513 233 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 CCNYQ8ND76 341 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 CNGB3Q9NQW8 809 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 CAMSAP1Q5T5Y3 1602 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 WDR47O94967 919 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 IL13P35225 146 aa13.26□□□□□ -0.29
SRGAP3-202ENST00000383836 SCP2P22307 547 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 CHRNA3P32297 505 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 DNAL1Q4LDG9 190 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 ADCY10Q96PN6 1610 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 ESYT3A0FGR9 886 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 SNF8Q96H20 258 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 SENP1Q9P0U3 644 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 FANCAO15360 1455 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 MYH7BA7E2Y1 1941 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 XKR9Q5GH70 373 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 LRIG3Q6UXM1 1119 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
SRGAP3-202ENST00000383836 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms