RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 DACT2Q5SW24 774 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 SH3GLB2Q9NR46 395 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 DLG5Q8TDM6 1919 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 WNT10BO00744 389 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 FKBP3Q00688 224 aaKnown RBP20.47■□□□□ 0.87
CSPG5-202ENST00000383738 SWSAP1Q6NVH7 229 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 MTA3Q9BTC8 594 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 VCPKMTQ9H867 229 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 MLXIPLQ9NP71 852 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 CTTNBP2NLQ9P2B4 639 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 KIF1AQ12756 1690 aa20.47■□□□□ 0.87
CSPG5-202ENST00000383738 SPOPO43791 374 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 GYPCP04921 128 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 HOXA10P31260 410 aaPredicted RBP20.46■□□□□ 0.87
CSPG5-202ENST00000383738 AGPAT5Q9NUQ2 364 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 ANAPC4Q9UJX5 808 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 FEM1BQ9UK73 627 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 CCDC63Q8NA47 563 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 OR2W6PQ8NHA6 318 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 HPCAL4Q9UM19 191 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 UTP11Q9Y3A2 253 aaKnown RBP20.46■□□□□ 0.87
CSPG5-202ENST00000383738 FAM205AQ6ZU69 1335 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 ABL1P00519 1130 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 ZBTB16Q05516 673 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 IFI16Q16666 785 aaKnown RBP20.46■□□□□ 0.87
CSPG5-202ENST00000383738 FAM167BQ9BTA0 163 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 KMT5AQ9NQR1 393 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 FAM217BQ9NTX9 383 aaPredicted RBP20.46■□□□□ 0.87
CSPG5-202ENST00000383738 HOXC10Q9NYD6 342 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 CCDC160A6NGH7 325 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 CHUKO15111 745 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 CCDC26Q8TAB7 109 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 ATP6V0A1Q93050 837 aa20.46■□□□□ 0.87
CSPG5-202ENST00000383738 ADD3Q9UEY8 706 aaKnown RBP20.46■□□□□ 0.87
CSPG5-202ENST00000383738 OSBPP22059 807 aa20.45■□□□□ 0.86
CSPG5-202ENST00000383738 TOB1P50616 345 aaPredicted RBP20.45■□□□□ 0.86
CSPG5-202ENST00000383738 MYO1EQ12965 1108 aa20.45■□□□□ 0.86
CSPG5-202ENST00000383738 APOBEC3FQ8IUX4 373 aaKnown RBP20.45■□□□□ 0.86
CSPG5-202ENST00000383738 ADAMTS1Q9UHI8 967 aa20.45■□□□□ 0.86
CSPG5-202ENST00000383738 PARVGQ9HBI0 331 aa20.45■□□□□ 0.86
CSPG5-202ENST00000383738 NYAP2Q9P242 653 aa20.45■□□□□ 0.86
CSPG5-202ENST00000383738 CAPN12Q6ZSI9 719 aa20.45■□□□□ 0.86
CSPG5-202ENST00000383738 RGS16O15492 202 aaPredicted RBP20.44■□□□□ 0.86
CSPG5-202ENST00000383738 DGKZQ13574 1117 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 EXOC3L4Q17RC7 722 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 MAP1SQ66K74 1059 aaPredicted RBP20.44■□□□□ 0.86
CSPG5-202ENST00000383738 ILDR1Q86SU0 546 aaPredicted RBP20.44■□□□□ 0.86
CSPG5-202ENST00000383738 ZNF280CQ8ND82 737 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 GABBR1Q9UBS5 961 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 TUBE1Q9UJT0 475 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 PLAAQ9Y263 795 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 SLIT3O75094 1523 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 SKAP2O75563 359 aaPredicted RBP20.44■□□□□ 0.86
CSPG5-202ENST00000383738 CCNE1P24864 410 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 SHMT1P34896 483 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 NR1I3Q14994 352 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 FMNL3Q8IVF7 1028 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 FAM186BQ8IYM0 893 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 MB21D1Q8N884 522 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 BEGAINQ9BUH8 593 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 CCND2P30279 289 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 KIF11P52732 1056 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 STK17AQ9UEE5 414 aa20.44■□□□□ 0.86
CSPG5-202ENST00000383738 CCNA1P78396 465 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 CEP55Q53EZ4 464 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 C2orf69Q8N8R5 385 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 FHDC1Q9C0D6 1143 aaPredicted RBP20.43■□□□□ 0.86
CSPG5-202ENST00000383738 hCG_1984214I3L0E3 225 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 SLC16A4O15374 487 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 SLC37A4O43826 429 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 STAT1P42224 750 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 ZRSR2Q15696 482 aaKnown RBP20.43■□□□□ 0.86
CSPG5-202ENST00000383738 RSRC2Q7L4I2 434 aaKnown RBP20.43■□□□□ 0.86
CSPG5-202ENST00000383738 ZNF713Q8N859 430 aaPredicted RBP20.43■□□□□ 0.86
CSPG5-202ENST00000383738 ARL8AQ96BM9 186 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 RIC8AQ9NPQ8 531 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 RHBDL3P58872 404 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 INTS8Q75QN2 995 aaKnown RBP20.43■□□□□ 0.86
CSPG5-202ENST00000383738 CYP2W1Q8TAV3 490 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 KCNV2Q8TDN2 545 aa20.43■□□□□ 0.86
CSPG5-202ENST00000383738 KCNJ6P48051 423 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 KLK7P49862 253 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 ATP11AP98196 1134 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 DHX9Q08211 1270 aaKnown RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 COG2Q14746 738 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 NRBP2Q9NSY0 501 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 DNAJC17Q9NVM6 304 aaKnown RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 DMGDHQ9UI17 866 aaKnown RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 PCDHA13Q9Y5I0 950 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 RCAN1P53805 252 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 PKN1Q16512 942 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 ZNF354CQ86Y25 554 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 THNSL1Q8IYQ7 743 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 GLIS2Q9BZE0 524 aaPredicted RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 PALM3A6NDB9 673 aaPredicted RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 TMOD1P28289 359 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 AP3B2Q13367 1082 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 SPATA4Q8NEY3 305 aa20.42■□□□□ 0.86
CSPG5-202ENST00000383738 NSUN6Q8TEA1 469 aaKnown RBP20.42■□□□□ 0.86
CSPG5-202ENST00000383738 LXNQ9BS40 222 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms