RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 VCXQ9H320 206 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 BATF3Q9NR55 127 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 NHSL1Q5SYE7 1610 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 MEIS1O00470 390 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 ALDH3A1P30838 453 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 LRIG3Q6UXM1 1119 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 PHLDB2Q86SQ0 1253 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 MAPKAPK5Q8IW41 473 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 PPFIBP2Q8ND30 876 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 NUDCD1Q96RS6 583 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 NAP1L3Q99457 506 aaPredicted RBP13.17□□□□□ -0.3
SHOX-203ENST00000381578 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 THAP12O43422 761 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 KCNJ1P48048 391 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 UAP1Q16222 522 aaPredicted RBP13.17□□□□□ -0.3
SHOX-203ENST00000381578 EAPPQ56P03 285 aaPredicted RBP13.17□□□□□ -0.3
SHOX-203ENST00000381578 GLYCTKQ8IVS8 523 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 SYCP3Q8IZU3 236 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 DTX3LQ8TDB6 740 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 LRRC27Q9C0I9 530 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
SHOX-203ENST00000381578 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 MTUS1Q9ULD2 1270 aa13.17□□□□□ -0.3
SHOX-203ENST00000381578 POC1B-GALNT4F8VUJ3 575 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 EIF3BP55884 814 aaKnown RBP13.16□□□□□ -0.3
SHOX-203ENST00000381578 CHRNDQ07001 517 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 NAALADL2Q58DX5 795 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 MIIPQ5JXC2 388 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 GJB7Q6PEY0 223 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 RPUSD2Q8IZ73 545 aaKnown RBP13.16□□□□□ -0.3
SHOX-203ENST00000381578 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 MROH5Q6ZUA9 1318 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
SHOX-203ENST00000381578 GCNT3O95395 438 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 BAG2O95816 211 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 CYP4A11Q02928 519 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
SHOX-203ENST00000381578 SUSD4Q5VX71 490 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 KIAA0895Q8NCT3 520 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 PKD1L3Q7Z443 1732 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 CFAP73A6NFT4 308 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 TMEM154Q6P9G4 183 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 SEPT14Q6ZU15 432 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 RAB3IPQ96QF0 476 aaPredicted RBP13.16□□□□□ -0.3
SHOX-203ENST00000381578 CCDC77Q9BR77 488 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 PITPNM3Q9BZ71 974 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 FAM129AQ9BZQ8 928 aa13.16□□□□□ -0.3
SHOX-203ENST00000381578 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
SHOX-203ENST00000381578 USP15Q9Y4E8 981 aaPredicted RBP13.16□□□□□ -0.3
SHOX-203ENST00000381578 CCDC188H7C350 402 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 BRAFP15056 766 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 DRD4P21917 467 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
SHOX-203ENST00000381578 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 FOXO6A8MYZ6 492 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 F8VZ95 297 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 C21orf2O43822 256 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 PHLPP1O60346 1717 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 CYP2J2P51589 502 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
SHOX-203ENST00000381578 PABPC4Q13310 644 aaKnown RBP eCLIP13.15□□□□□ -0.3
SHOX-203ENST00000381578 C6orf118Q5T5N4 469 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 AGBL2Q5U5Z8 902 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 NBPF5PQ86XG9 351 aaPredicted RBP13.15□□□□□ -0.3
SHOX-203ENST00000381578 TGFBRAP1Q8WUH2 860 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 RUBCNQ92622 972 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 P3H4Q92791 437 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 TGS1Q96RS0 853 aaKnown RBP13.15□□□□□ -0.3
SHOX-203ENST00000381578 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 SEMA4AQ9H3S1 761 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 C5P01031 1676 aa13.15□□□□□ -0.3
SHOX-203ENST00000381578 SSU72P8A0A1W2PR75 194 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 SFI1A8K8P3 1242 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 E9PMD0 336 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 F8W031 263 aaPredicted RBP13.15□□□□□ -0.31
SHOX-203ENST00000381578 TDP2O95551 362 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 FECHP22830 423 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 HSPA1LP34931 641 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 TMED2Q15363 201 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 ANKRD20A2Q5SQ80 823 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 ANKRD20A1Q5TYW2 823 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 ANKRD20A3Q5VUR7 823 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 UNC13DQ70J99 1090 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 ADGRA1Q86SQ6 560 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 TEKT4Q8WW24 435 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 PIGSQ96S52 555 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.31
SHOX-203ENST00000381578 A0A1W2PQJ5 194 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 SPAG7O75391 227 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms