RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 USP15Q9Y4E8 981 aaPredicted RBP13.2□□□□□ -0.3
HERC6-203ENST00000380265 H0Y3Z8 333 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 CYTH3O43739 400 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 GFPT2O94808 682 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 TDP2O95551 362 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 GRIK3Q13003 919 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 ANKRD20A2Q5SQ80 823 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 ANKRD20A1Q5TYW2 823 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 ANKRD20A3Q5VUR7 823 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 GALNT17Q6IS24 598 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 KCNK18Q7Z418 384 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 SLC44A5Q8NCS7 719 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 RAD54LQ92698 747 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 STMN4Q9H169 189 aaPredicted RBP13.19□□□□□ -0.3
HERC6-203ENST00000380265 PABPC3Q9H361 631 aaKnown RBP13.19□□□□□ -0.3
HERC6-203ENST00000380265 HOMER3Q9NSC5 361 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 HDAC9Q9UKV0 1011 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 LAMB4A4D0S4 1761 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 C6orf118Q5T5N4 469 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
HERC6-203ENST00000380265 CEP120Q8N960 986 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 PIGBQ92521 554 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 TLCD1Q96CP7 247 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 OSGEPQ9NPF4 335 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 TFCP2L1Q9NZI6 479 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 MSH2P43246 934 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 VSIG1Q86XK7 387 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 CCDC65Q8IXS2 484 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 PROM2Q8N271 834 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 PNMA5Q96PV4 448 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 TRIM7Q9C029 511 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 ETNK1Q9HBU6 452 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 DNAJC17Q9NVM6 304 aaKnown RBP13.19□□□□□ -0.3
HERC6-203ENST00000380265 TMOD4Q9NZQ9 345 aa13.19□□□□□ -0.3
HERC6-203ENST00000380265 ACSL3O95573 720 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 COPS2P61201 443 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 MECOMQ03112 1051 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 CTNNBL1Q8WYA6 563 aaPredicted RBP13.18□□□□□ -0.3
HERC6-203ENST00000380265 ERP44Q9BS26 406 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 ARMCX3Q9UH62 379 aaPredicted RBP13.18□□□□□ -0.3
HERC6-203ENST00000380265 SAP30BPQ9UHR5 308 aaKnown RBP13.18□□□□□ -0.3
HERC6-203ENST00000380265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
HERC6-203ENST00000380265 LUC7L3O95232 432 aaKnown RBP13.18□□□□□ -0.3
HERC6-203ENST00000380265 UCHL3P15374 230 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 RIPK1Q13546 671 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 MIS18BP1Q6P0N0 1132 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 GJB7Q6PEY0 223 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 TSC22D3Q99576 134 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 FGFBP2Q9BYJ0 223 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 ABCB11O95342 1321 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 PKD1L3Q7Z443 1732 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 DDX60Q8IY21 1712 aaKnown RBP13.18□□□□□ -0.3
HERC6-203ENST00000380265 GNA14O95837 355 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 NEFHP12036 1026 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 ADCY2Q08462 1091 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 SNX1Q13596 522 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 PIGWQ7Z7B1 504 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
HERC6-203ENST00000380265 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
HERC6-203ENST00000380265 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 KLHL14Q9P2G3 628 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 ARPP21Q9UBL0 812 aaPredicted RBP13.18□□□□□ -0.3
HERC6-203ENST00000380265 MAD2L2Q9UI95 211 aa13.18□□□□□ -0.3
HERC6-203ENST00000380265 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 RAD21O60216 631 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 SNX3O60493 162 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 PPFIA2O75334 1257 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 RARAP10276 462 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 PLCG2P16885 1265 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 PRDX5P30044 214 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 MMP13P45452 471 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 CTCFP49711 727 aaPredicted RBP13.17□□□□□ -0.3
HERC6-203ENST00000380265 SESN3P58005 492 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 ZNF268Q14587 947 aaPredicted RBP13.17□□□□□ -0.3
HERC6-203ENST00000380265 GRM4Q14833 912 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 LONRF1Q17RB8 773 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 KIAA1755Q5JYT7 1200 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 C10orf76Q5T2E6 689 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
HERC6-203ENST00000380265 GPBP1Q86WP2 473 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 LMNTD2Q8IXW0 634 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
HERC6-203ENST00000380265 PIGSQ96S52 555 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 AIPL1Q9NZN9 384 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 AFF2P51816 1311 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 E9PMD0 336 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 GBP1P32455 592 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 GALCP54803 685 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 FAM47EQ6ZV65 393 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 JAMLQ86YT9 394 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 CCDC105Q8IYK2 499 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
HERC6-203ENST00000380265 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 NIP7Q9Y221 180 aaKnown RBP eCLIP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms