RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 FAM160B2Q86V87 743 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 CCDC125Q86Z20 511 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 EHBP1Q8NDI1 1231 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 IL31RAQ8NI17 732 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 ZNF577Q9BSK1 485 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 EDEM3Q9BZQ6 932 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 GANQ9H2C0 597 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 RAB21Q9UL25 225 aa8.76□□□□□ -1.01
PDLIM5-204ENST00000380176 ZMYM2Q9UBW7 1377 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 PDXKO00764 312 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 TGFB1I1O43294 461 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 TBCAO75347 108 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 ITGB5P18084 799 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 RASSF7Q02833 373 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 DMTNQ08495 405 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 COG2Q14746 738 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 SFMBT2Q5VUG0 894 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 CPXCR1Q8N123 301 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 BANK1Q8NDB2 785 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 TEPSINQ96N21 525 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 TUFT1Q9NNX1 390 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 ABCB6Q9NP58 842 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 JADE2Q9NQC1 790 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 CCPG1Q9ULG6 757 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 IPO5O00410 1097 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 NR3C1P04150 777 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 TRAF1Q13077 416 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 RAPGEF1Q13905 1077 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 BRD3Q15059 726 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 BMT2Q1RMZ1 405 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 BEND6Q5SZJ8 279 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 CIAPIN1Q6FI81 312 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 B3GNT9Q6UX72 402 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM43BQ6ZT52 329 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 MYCT1Q8N699 235 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM133AQ8N9E0 248 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 CLEC4DQ8WXI8 215 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 FIZ1Q96SL8 496 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 TSGA10Q9BZW7 698 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 ARMCX3Q9UH62 379 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM184BQ9ULE4 1060 aa8.75□□□□□ -1.01
PDLIM5-204ENST00000380176 SSU72P8A0A1W2PR75 194 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 BUB1O43683 1085 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 USO1O60763 962 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 ICAM1P05362 532 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 EPS15P42566 896 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 HSD17B4P51659 736 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 SLC9C1Q4G0N8 1177 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 MUM1L1Q5H9M0 696 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 DCAF17Q5H9S7 520 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 FRMD5Q7Z6J6 570 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 HOOK2Q96ED9 719 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 PSMB7Q99436 277 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 WDR11Q9BZH6 1224 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 OLFML3Q9NRN5 406 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 HOMER2Q9NSB8 354 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 TYW1Q9NV66 732 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 PIM2Q9P1W9 311 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 A0A087X0T9 212 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 ANO9A1A5B4 782 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 NCK2O43639 380 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 CALUO43852 315 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM13AO94988 1023 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 ZBTB7AO95365 584 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 SERPING1P05155 500 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 FAM228BP0C875 321 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 PON1P27169 355 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 CXCR5P32302 372 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 TCERG1LQ5VWI1 586 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 TRIM58Q8NG06 486 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 COG1Q8WTW3 980 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 MXRA8Q9BRK3 442 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 LXNQ9BS40 222 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 UBXN6Q9BZV1 441 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 RAVER2Q9HCJ3 691 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 ZCCHC17Q9NP64 241 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 AJAP1Q9UKB5 411 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 RBAK-RBAKDNI3L0D1 243 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 PJA2O43164 708 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 ATP8B1O43520 1251 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 AFPP02771 609 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 TERF2Q15554 542 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 AMHR2Q16671 573 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 GJB7Q6PEY0 223 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 SAMD7Q7Z3H4 446 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 DNAAF5Q86Y56 855 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 HNRNPLLQ8WVV9 542 aaKnown RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 SYN2Q92777 582 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 SLC35C1Q96A29 364 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 HINFPQ9BQA5 517 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 PACSIN1Q9BY11 444 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 VPS33BQ9H267 617 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 KCNH7Q9NS40 1196 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 SMARCAL1Q9NZC9 954 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 EHD2Q9NZN4 543 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 ADAMTS1Q9UHI8 967 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 SNX12Q9UMY4 172 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 JRKLQ9Y4A0 524 aa8.74□□□□□ -1.01
PDLIM5-204ENST00000380176 NFKBIEO00221 500 aa8.73□□□□□ -1.01
PDLIM5-204ENST00000380176 MAP2K7O14733 419 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms