RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 EDEM3Q9BZQ6 932 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 CTDP1Q9Y5B0 961 aaPredicted RBP16.32■□□□□ 0.2
PRNP-201ENST00000379440 MYCLP12524 364 aaPredicted RBP16.32■□□□□ 0.2
PRNP-201ENST00000379440 ACTN1P12814 892 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 GFPT1Q06210 699 aaPredicted RBP16.32■□□□□ 0.2
PRNP-201ENST00000379440 KIF5AQ12840 1032 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
PRNP-201ENST00000379440 MAEAQ7L5Y9 396 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 GPR161Q8N6U8 529 aaKnown RBP16.32■□□□□ 0.2
PRNP-201ENST00000379440 CEP112Q8N8E3 955 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 TRERF1Q96PN7 1200 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 WRNIP1Q96S55 665 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 FIZ1Q96SL8 496 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 NCAPGQ9BPX3 1015 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 IFIH1Q9BYX4 1025 aaKnown RBP16.32■□□□□ 0.2
PRNP-201ENST00000379440 CEP83Q9Y592 693 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 UBIAD1Q9Y5Z9 338 aa16.32■□□□□ 0.2
PRNP-201ENST00000379440 FRMPD4Q14CM0 1322 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 BCRP11274 1271 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 SLC9A1P19634 815 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 COG2Q14746 738 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 PCNX4Q63HM2 1172 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 NLGN2Q8NFZ4 835 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 SGIP1Q9BQI5 828 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 PARD6BQ9BYG5 372 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 AGO4Q9HCK5 861 aaKnown RBP16.31■□□□□ 0.2
PRNP-201ENST00000379440 PCDHB13Q9Y5F0 798 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 ZMYM2Q9UBW7 1377 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 VWA5AO00534 786 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 SRGAP2O75044 1071 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 ZBED4O75132 1171 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 BACE1P56817 501 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 GHRHRQ02643 423 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 TDRD12Q587J7 1177 aaKnown RBP16.31■□□□□ 0.2
PRNP-201ENST00000379440 SFMBT2Q5VUG0 894 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 TRMT1LQ7Z2T5 733 aaKnown RBP16.31■□□□□ 0.2
PRNP-201ENST00000379440 SCYL3Q8IZE3 742 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 RABGGTAQ92696 567 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 SH2D3AQ9BRG2 576 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 GINM1Q9NU53 330 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 SAMM50Q9Y512 469 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 CD2APQ9Y5K6 639 aa16.31■□□□□ 0.2
PRNP-201ENST00000379440 PTPRAP18433 802 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 MUTP22033 750 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 ARID5AQ03989 594 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 MTMR1Q13613 665 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 TUBB2AQ13885 445 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 PGM5Q15124 567 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
PRNP-201ENST00000379440 TCERG1LQ5VWI1 586 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 ZNF720Q7Z2F6 126 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 TUBB2BQ9BVA1 445 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 GANQ9H2C0 597 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 JADE2Q9NQC1 790 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 LTBP3Q9NS15 1303 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 SEC31AO94979 1220 aaKnown RBP16.3■□□□□ 0.2
PRNP-201ENST00000379440 LCA5LO95447 670 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 AFPP02771 609 aaKnown RBP16.3■□□□□ 0.2
PRNP-201ENST00000379440 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
PRNP-201ENST00000379440 USP14P54578 494 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 ENOX2Q16206 610 aaKnown RBP16.3■□□□□ 0.2
PRNP-201ENST00000379440 ODR4Q5SWX8 454 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 DCAF15Q66K64 600 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 TRAPPC11Q7Z392 1133 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 FAM178BQ8IXR5 827 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 MLXIPQ9HAP2 919 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
PRNP-201ENST00000379440 EIF3DO15371 548 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRNP-201ENST00000379440 ATP9AO75110 1047 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 HIP1RO75146 1068 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 RPL13P26373 211 aaKnown RBP16.29■□□□□ 0.2
PRNP-201ENST00000379440 ZNF131P52739 623 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 HMGCS2P54868 508 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 PLS1Q14651 629 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 WHAMMP3Q1A5X7 153 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 DPY19L2P1Q6NXN4 242 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 RNF207Q6ZRF8 634 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 DAW1Q8N136 415 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 ANKRD13CQ8N6S4 541 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 ZNF280CQ8ND82 737 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 P4HBP07237 508 aaKnown RBP16.29■□□□□ 0.2
PRNP-201ENST00000379440 MAGEA1P43355 309 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 PADI6Q6TGC4 694 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 NIPA1Q7RTP0 329 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 EHBP1Q8NDI1 1231 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 PICK1Q9NRD5 415 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 ARGLU1Q9NWB6 273 aaPredicted RBP16.29■□□□□ 0.2
PRNP-201ENST00000379440 RSPH14Q9UHP6 348 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 ZNF112Q9UJU3 913 aa16.29■□□□□ 0.2
PRNP-201ENST00000379440 TMEM150BA6NC51 233 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 EPB41P11171 864 aaKnown RBP16.28■□□□□ 0.2
PRNP-201ENST00000379440 MAPK7Q13164 816 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
PRNP-201ENST00000379440 FAM133AQ8N9E0 248 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms