RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CFAP45Q9UL16 551 aa20.97■□□□□ 0.95
SSU72-203ENST00000378725 PPME1Q9Y570 386 aa20.97■□□□□ 0.95
SSU72-203ENST00000378725 ATP6V1DQ9Y5K8 247 aa20.97■□□□□ 0.95
SSU72-203ENST00000378725 UMODL1Q5DID0 1318 aa20.97■□□□□ 0.95
SSU72-203ENST00000378725 SMIM35A0A1B0GVV1 85 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 CAND2O75155 1236 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 PPP6R2O75170 966 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 RPLP2P05387 115 aaKnown RBP20.96■□□□□ 0.95
SSU72-203ENST00000378725 CKBP12277 381 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 CYP2C18P33260 490 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 CCT6AP40227 531 aaKnown RBP20.96■□□□□ 0.95
SSU72-203ENST00000378725 STK38Q15208 465 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 ECM1Q16610 540 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 FOXD4L6Q3SYB3 417 aaPredicted RBP20.96■□□□□ 0.95
SSU72-203ENST00000378725 HYIQ5T013 277 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 FOXD4L3Q6VB84 417 aaPredicted RBP20.96■□□□□ 0.95
SSU72-203ENST00000378725 RETREG2Q8NC44 543 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 SNX29Q8TEQ0 813 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 NACC1Q96RE7 527 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 PPP1R12CQ9BZL4 782 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 CYP26B1Q9NR63 512 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 CIZ1Q9ULV3 898 aaPredicted RBP20.96■□□□□ 0.95
SSU72-203ENST00000378725 DNAH12Q6ZR08 3092 aa20.96■□□□□ 0.95
SSU72-203ENST00000378725 IGKV6-21A0A0C4DH24 114 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 SPTLC2O15270 562 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 SLC26A4O43511 780 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 IQCF3P0C7M6 154 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 NPEPPSP55786 919 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 MTERF2Q49AM1 385 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 PLA2G4FQ68DD2 849 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 TRAF7Q6Q0C0 670 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 NME8Q8N427 588 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 LINC01465Q8N7H1 131 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 ZNF579Q8NAF0 562 aaKnown RBP20.95■□□□□ 0.94
SSU72-203ENST00000378725 BADQ92934 168 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 CEP170P1Q96L14 293 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 WNT8AQ9H1J5 351 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 RCOR1Q9UKL0 485 aa20.95■□□□□ 0.94
SSU72-203ENST00000378725 MAFO75444 373 aaPredicted RBP20.94■□□□□ 0.94
SSU72-203ENST00000378725 SELPP16109 830 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 THPOP40225 353 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 FAM26DQ5JW98 314 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 ZNF618Q5T7W0 954 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 KIAA0319LQ8IZA0 1049 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 TMEM199Q8N511 208 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 KCTD17Q8N5Z5 321 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 KRI1Q8N9T8 703 aaKnown RBP20.94■□□□□ 0.94
SSU72-203ENST00000378725 PIGOQ8TEQ8 1089 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 DNAJB3Q8WWF6 145 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 LBHD1Q9BQE6 289 aaPredicted RBP20.94■□□□□ 0.94
SSU72-203ENST00000378725 SH2D3AQ9BRG2 576 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 CSRNP2Q9H175 543 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 PCDH10Q9P2E7 1040 aa20.94■□□□□ 0.94
SSU72-203ENST00000378725 DBR1Q9UK59 544 aaKnown RBP20.94■□□□□ 0.94
SSU72-203ENST00000378725 A0A087WWV3 80 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 RARRES1P49788 294 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 CCL23P55773 120 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 TBC1D8BQ0IIM8 1120 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 XKR9Q5GH70 373 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 EFCAB12Q6NXP0 572 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 POTEGQ6S5H5 508 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 RSPH3Q86UC2 560 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 EXOC8Q8IYI6 725 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 CLIC6Q96NY7 704 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 GDF15Q99988 308 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 CCSER1Q9C0I3 900 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 DHX33Q9H6R0 707 aaKnown RBP20.93■□□□□ 0.94
SSU72-203ENST00000378725 KIAA1024Q9UPX6 916 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 WDR81Q562E7 1941 aa20.93■□□□□ 0.94
SSU72-203ENST00000378725 MYH9P35579 1960 aaKnown RBP20.93■□□□□ 0.94
SSU72-203ENST00000378725 TNRC18O15417 2968 aaPredicted RBP20.93■□□□□ 0.94
SSU72-203ENST00000378725 PARNO95453 639 aaKnown RBP20.92■□□□□ 0.94
SSU72-203ENST00000378725 RFC5P40937 340 aa20.92■□□□□ 0.94
SSU72-203ENST00000378725 MAGEA10P43363 369 aaPredicted RBP20.92■□□□□ 0.94
SSU72-203ENST00000378725 KRT85P78386 507 aa20.92■□□□□ 0.94
SSU72-203ENST00000378725 MDM2Q00987 491 aaPredicted RBP20.92■□□□□ 0.94
SSU72-203ENST00000378725 LRRC8DQ7L1W4 858 aa20.92■□□□□ 0.94
SSU72-203ENST00000378725 CABP7Q86V35 215 aa20.92■□□□□ 0.94
SSU72-203ENST00000378725 KCNG4Q8TDN1 519 aa20.92■□□□□ 0.94
SSU72-203ENST00000378725 PNMA5Q96PV4 448 aa20.92■□□□□ 0.94
SSU72-203ENST00000378725 JPH2Q9BR39 696 aaPredicted RBP20.92■□□□□ 0.94
SSU72-203ENST00000378725 DDX19AQ9NUU7 478 aaKnown RBP20.92■□□□□ 0.94
SSU72-203ENST00000378725 RSPH10B2B2RC85 870 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 RSPH10BP0C881 870 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 CSF2RAP15509 400 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 TMOD1P28289 359 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 RFC2P35250 354 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 UBA7P41226 1012 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 MGAT3Q09327 533 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 GRB10Q13322 594 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 MKRN4PQ13434 485 aaPredicted RBP20.91■□□□□ 0.94
SSU72-203ENST00000378725 GPNMBQ14956 572 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 METTL13Q8N6R0 699 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 VWCEQ96DN2 955 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 SCLYQ96I15 445 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 NT5C3AQ9H0P0 336 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 FAM49AQ9H0Q0 323 aaPredicted RBP20.91■□□□□ 0.94
SSU72-203ENST00000378725 KDM3AQ9Y4C1 1321 aa20.91■□□□□ 0.94
SSU72-203ENST00000378725 CHRNA1P02708 482 aa20.9■□□□□ 0.94
SSU72-203ENST00000378725 BMP8BP34820 402 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms