RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 RASSF7Q02833 373 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 TMEM62Q0P6H9 643 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 SNX30Q5VWJ9 437 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
NPHP4-202ENST00000378161 TRAPPC11Q7Z392 1133 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 FAM89AQ96GI7 184 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 LRRC37BQ96QE4 947 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 CCDC28BQ9BUN5 200 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 KLHL25Q9H0H3 589 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 GIMAP4Q9NUV9 329 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 TMOD2Q9NZR1 351 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 CAPN1P07384 714 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 FOSL1P15407 271 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 PPP2R5BQ15173 497 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 RASSF3Q86WH2 238 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-202ENST00000378161 FERMT1Q9BQL6 677 aa12.65□□□□□ -0.38
NPHP4-202ENST00000378161 OCM2P0CE71 109 aa12.65□□□□□ -0.39
NPHP4-202ENST00000378161 OCMP0CE72 109 aaPredicted RBP12.65□□□□□ -0.39
NPHP4-202ENST00000378161 IDO1P14902 403 aa12.65□□□□□ -0.39
NPHP4-202ENST00000378161 SPATA1Q5VX52 437 aa12.65□□□□□ -0.39
NPHP4-202ENST00000378161 CCT6BQ92526 530 aa12.65□□□□□ -0.39
NPHP4-202ENST00000378161 PTPRN2Q92932 1015 aa12.65□□□□□ -0.39
NPHP4-202ENST00000378161 SMIM31A0A1B0GVY4 71 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 MAN1A2O60476 641 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 TFRCP02786 760 aaKnown RBP12.64□□□□□ -0.39
NPHP4-202ENST00000378161 CHN1P15882 459 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 ZAP70P43403 619 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 KRT76Q01546 638 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 CNPY1Q3B7I2 92 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.64□□□□□ -0.39
NPHP4-202ENST00000378161 CAVIN3Q969G5 261 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 GPR108Q9NPR9 543 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 CYP39A1Q9NYL5 469 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 ASAP2O43150 1006 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 CCR3P51677 355 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 C16orf72Q14CZ0 275 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 LRRC34Q8IZ02 419 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 RIBC1Q8N443 379 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-202ENST00000378161 VPS37AQ8NEZ2 397 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 TMBIM4Q9HC24 238 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 BICDL2A1A5D9 508 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 PSMD14O00487 310 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 SPAG7O75391 227 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 MARK3P27448 753 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 NDST4Q9H3R1 872 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 SELENONQ9NZV5 590 aa12.64□□□□□ -0.39
NPHP4-202ENST00000378161 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 STAM2O75886 525 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
NPHP4-202ENST00000378161 EIF2B5Q13144 721 aaKnown RBP12.63□□□□□ -0.39
NPHP4-202ENST00000378161 TUBA3EQ6PEY2 450 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 C1orf228Q6PIY5 440 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 TMC5Q6UXY8 1006 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 THAP11Q96EK4 314 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 DSEQ9UL01 958 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 NRXN1Q9ULB1 1477 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 CARMIL3Q8ND23 1372 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 PLEKHG1Q9ULL1 1385 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 AGPSO00116 658 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 CAPN9O14815 690 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 GYG2O15488 501 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 FGAP02671 866 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 LDHCP07864 332 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 ASIC1P78348 528 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 GSTA3Q16772 222 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 DPY19L2Q6NUT2 758 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 NOP9Q86U38 636 aaKnown RBP12.63□□□□□ -0.39
NPHP4-202ENST00000378161 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 LINC00301Q8NCQ3 95 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 ZKSCAN3Q9BRR0 538 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
NPHP4-202ENST00000378161 DMGDHQ9UI17 866 aaKnown RBP12.63□□□□□ -0.39
NPHP4-202ENST00000378161 MOSPD1Q9UJG1 213 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 CLIC4Q9Y696 253 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.63□□□□□ -0.39
NPHP4-202ENST00000378161 NOTOA8MTQ0 251 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 ZNF185O15231 689 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 SPTLC1O15269 473 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 ASMTLO95671 621 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 KRT10P13645 584 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 IL2RBP14784 551 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 WASHC2DQ5SRD0 308 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.63□□□□□ -0.39
NPHP4-202ENST00000378161 SCG3Q8WXD2 468 aaKnown RBP12.63□□□□□ -0.39
NPHP4-202ENST00000378161 FERMT2Q96AC1 680 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 VPS50Q96JG6 964 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
NPHP4-202ENST00000378161 PPIP5K2O43314 1243 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 WFS1O76024 890 aa12.62□□□□□ -0.39
NPHP4-202ENST00000378161 ALDH1B1P30837 517 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms