RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CPT1AP50416 773 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 BEX3Q00994 111 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 MAP2K1Q02750 393 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 C11orf57Q6ZUT1 292 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 ARMCX2Q7L311 632 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 EHBP1Q8NDI1 1231 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 NEK9Q8TD19 979 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 KATNAL1Q9BW62 490 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 ZNF286BP0CG31 522 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 ELNP15502 786 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 CCNE1P24864 410 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 ADCYAP1R1P41586 468 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 FLT3LGP49771 235 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 CLCN3P51790 818 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 MYO1EQ12965 1108 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 IER5Q5VY09 327 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 SPECC1LQ69YQ0 1117 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 SLFN12LQ6IEE8 588 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 SHC4Q6S5L8 630 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 DEFB128Q7Z7B8 93 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 ERO1AQ96HE7 468 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 DHTKD1Q96HY7 919 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 SDK1Q7Z5N4 2213 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 GOLGA6L10A0A0M3HER8 536 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 BTBD19C9JJ37 291 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 CYTH3O43739 400 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 DGAT1O75907 488 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 ACOT2P49753 483 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 SNX16P57768 344 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 PTK2Q05397 1052 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 COASYQ13057 564 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 RESP18Q5W5W9 173 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 CATSPERGQ6ZRH7 1159 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 SCN4BQ8IWT1 228 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 MAP3K14Q99558 947 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 NUP58Q9BVL2 599 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 ALDH8A1Q9H2A2 487 aaPredicted RBP9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 CEP290O15078 2479 aa9.22□□□□□ -0.93
CRNKL1-202ENST00000377340 GOLGA8SH3BPF8 625 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 ZNF75DP51815 510 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 GRIN1Q05586 938 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 KIZQ2M2Z5 673 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 UNC13DQ70J99 1090 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 FMNL3Q8IVF7 1028 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 XXYLT1Q8NBI6 393 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 KIFC3Q9BVG8 833 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 SELENOOQ9BVL4 669 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 RIOX1Q9H6W3 641 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 UBE2TQ9NPD8 197 aaPredicted RBP9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 XPNPEP3Q9NQH7 507 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 AKAP12Q02952 1782 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 H3BRB1 525 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 MAFGO15525 162 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 U2AF2P26368 475 aaKnown RBP eCLIP9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 COPB1P53618 953 aaKnown RBP9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 OR8K1Q8NGG5 319 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 TUT1Q9H6E5 874 aaKnown RBP9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 PXMP2Q9NR77 195 aa9.21□□□□□ -0.93
CRNKL1-202ENST00000377340 STK25O00506 426 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 N4BP1O75113 896 aaKnown RBP9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 ERLIN1O75477 346 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 SMARCA1P28370 1054 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 GOLGA8FQ08AF8 430 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 GOLGA8DPQ0D2H9 430 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 KSR1Q8IVT5 923 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 ABHD16BQ9H3Z7 469 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 GOLPH3LQ9H4A5 285 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 SETD4Q9NVD3 440 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 ZDHHC9Q9Y397 364 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 THAP12O43422 761 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 EYA4O95677 639 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 PRPHP41219 470 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 FKBP1BP68106 108 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 CXCL17Q6UXB2 119 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 SH3BP5LQ7L8J4 393 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 COPS5Q92905 334 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 HEXIM2Q96MH2 286 aaKnown RBP9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 TIGD1Q96MW7 591 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 RIT2Q99578 217 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 NAA15Q9BXJ9 866 aaKnown RBP9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 MRPL4Q9BYD3 311 aaKnown RBP9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 SENP6Q9GZR1 1112 aaPredicted RBP9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 MTIF3Q9H2K0 278 aaKnown RBP9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 GPRC5CQ9NQ84 441 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 GCNT4Q9P109 453 aa9.21□□□□□ -0.94
CRNKL1-202ENST00000377340 LTBP4Q8N2S1 1624 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 HBP1O60381 514 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 AFPP02771 609 aaKnown RBP9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 PRKCBP05771 671 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 PDE6CP51160 858 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 IFFO1Q0D2I5 559 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 ZNF667Q5HYK9 610 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 CCDC114Q96M63 670 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 STIM2Q9P246 746 aa9.2□□□□□ -0.94
CRNKL1-202ENST00000377340 SPDYE5A6NIY4 337 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms