RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 CNOT7Q9UIV1 285 aaKnown RBP12.12□□□□□ -0.47
HDAC6-203ENST00000376619 CAPN11Q9UMQ6 739 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 NWD2Q9ULI1 1742 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 CYP11B2P19099 503 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 UAP1Q16222 522 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-203ENST00000376619 E2F4Q16254 413 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 DDX42Q86XP3 938 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDAC6-203ENST00000376619 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 DUSP9Q99956 384 aaKnown RBP12.12□□□□□ -0.47
HDAC6-203ENST00000376619 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-203ENST00000376619 BLOC1S4Q9NUP1 217 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 FAM198AQ9UFP1 575 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 AMFRQ9UKV5 643 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 EML1O00423 815 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 NDUFAB1O14561 156 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 HIP1RO75146 1068 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 BCRP11274 1271 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 ATF7P17544 494 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-203ENST00000376619 PLTPP55058 493 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 MAP3K9P80192 1104 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 HHIPL2Q6UWX4 724 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 PAF1Q8N7H5 531 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 SLC30A5Q8TAD4 765 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 NLRP4Q96MN2 994 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 PI4K2AQ9BTU6 479 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 HEMGNQ9BXL5 484 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 CSADQ9Y600 493 aa12.12□□□□□ -0.47
HDAC6-203ENST00000376619 A0A087X0T9 212 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 ZBTB22O15209 634 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 PPP1R11O60927 126 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 CSDE1O75534 798 aaKnown RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 FAM228BP0C875 321 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 DMP1Q13316 513 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 ANGEL2Q5VTE6 544 aaKnown RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 SULF1Q8IWU6 871 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 DCAF4Q8WV16 495 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 ATG4CQ96DT6 458 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 FAM213AQ9BRX8 229 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 RNF181Q9P0P0 153 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 ATP8A1Q9Y2Q0 1164 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 RNF40O75150 1001 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 CALCAP01258 141 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 KLRC1P26715 233 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 CXCL9Q07325 125 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 DRAP1Q14919 205 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 DCUN1D2Q6PH85 259 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 HAUS1Q96CS2 278 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 AZI2Q9H6S1 392 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 VIRMAQ69YN4 1812 aaKnown RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 ZSCAN5CA6NGD5 496 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 IFNAR2P48551 515 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 MXI1P50539 228 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 TFAMQ00059 246 aaKnown RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 TRPC3Q13507 836 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 SMAD1Q15797 465 aaKnown RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 NBPF12Q5TAG4 269 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-203ENST00000376619 CDKAL1Q5VV42 579 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 SESTD1Q86VW0 696 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 TMEM143Q96AN5 459 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 TAAR1Q96RJ0 339 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 C7orf25Q9BPX7 421 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 GOLGA8SH3BPF8 625 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 ACOT2P49753 483 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 KCNB1Q14721 858 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 BRD3Q15059 726 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 ADAM21Q9UKJ8 722 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 JRKLQ9Y4A0 524 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 CACNA1FO60840 1977 aa12.11□□□□□ -0.47
HDAC6-203ENST00000376619 DENND3A2RUS2 1198 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 GNA14O95837 355 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 TCP1P17987 556 aaKnown RBP12.1□□□□□ -0.47
HDAC6-203ENST00000376619 CTNNA1P35221 906 aaKnown RBP12.1□□□□□ -0.47
HDAC6-203ENST00000376619 CETN2P41208 172 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 RPS6P62753 249 aaKnown RBP12.1□□□□□ -0.47
HDAC6-203ENST00000376619 PRPF38AQ8NAV1 312 aaKnown RBP12.1□□□□□ -0.47
HDAC6-203ENST00000376619 CCDC151A5D8V7 595 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 CTIFO43310 598 aaKnown RBP12.1□□□□□ -0.47
HDAC6-203ENST00000376619 FGGP02679 453 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 SH2D3CQ8N5H7 860 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 RNF169Q8NCN4 708 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 MAGEF1Q9HAY2 307 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 AFDNP55196 1824 aaKnown RBP12.1□□□□□ -0.47
HDAC6-203ENST00000376619 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 RCCD1A6NED2 376 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 PIK3R2O00459 728 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 PRPHP41219 470 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 DYNLT1P63172 113 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 RSBN1LQ6PCB5 846 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-203ENST00000376619 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 ANKRD7Q92527 254 aa12.1□□□□□ -0.47
HDAC6-203ENST00000376619 OSBPL9Q96SU4 736 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms