RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 MLH3Q9UHC1 1453 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 PAPOLAP51003 745 aaKnown RBP10.52□□□□□ -0.72
SPEN-201ENST00000375759 ANGPTL8Q6UXH0 198 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 GRAMD1CQ8IYS0 662 aa10.52□□□□□ -0.72
SPEN-201ENST00000375759 CEP72Q9P209 647 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 CLIC2O15247 247 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 CCDC159P0C7I6 412 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 CYP27A1Q02318 531 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 MXD3Q9BW11 206 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 AKT3Q9Y243 479 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 WDR64B1ANS9 1081 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 PDE8BO95263 885 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 BTDP43251 543 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 ZBTB41Q5SVQ8 909 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 RYBPQ8N488 228 aaPredicted RBP10.52□□□□□ -0.73
SPEN-201ENST00000375759 NAF1Q96HR8 494 aaKnown RBP10.52□□□□□ -0.73
SPEN-201ENST00000375759 GCOM2Q9BZD3 368 aaPredicted RBP10.52□□□□□ -0.73
SPEN-201ENST00000375759 STRIP2Q9ULQ0 834 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 RNF103-CHMP3A0A140T963 221 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 PLA2G4BP0C869 781 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 SOX5P35711 763 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 DAB2P98082 770 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 LRRC41Q15345 812 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 TOGARAM2Q6ZUX3 1019 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 ASPSCR1Q9BZE9 553 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 SLC4A7Q9Y6M7 1214 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 ASXL2Q76L83 1435 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 M0R2C6 588 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 NLRP14Q86W24 1093 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 SIX6OS1Q8N1H7 587 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 SLC24A3Q9HC58 644 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 IFNAR1P17181 557 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 GYG1P46976 350 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 AARSP49588 968 aaKnown RBP eCLIP10.52□□□□□ -0.733e-6■■■□□ 19.2
SPEN-201ENST00000375759 KDM1AO60341 852 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 CCDC22O60826 627 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 PCCAP05165 728 aaPredicted RBP10.52□□□□□ -0.73
SPEN-201ENST00000375759 FAM47CQ5HY64 1035 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 ARMCX2Q7L311 632 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 OSBPL1AQ9BXW6 950 aa10.52□□□□□ -0.73
SPEN-201ENST00000375759 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
SPEN-201ENST00000375759 MORC2Q9Y6X9 1032 aaPredicted RBP10.52□□□□□ -0.73
SPEN-201ENST00000375759 SUFUQ9UMX1 484 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 TMCC1O94876 653 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 HAUS5O94927 633 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 COG4Q9H9E3 785 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 CHCHD3Q9NX63 227 aaKnown RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 INO80B-WBP1J3KQ70 363 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 KRT8P05787 483 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 CAPRIN1Q14444 709 aaKnown RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 EFTUD2Q15029 972 aaKnown RBP eCLIP10.51□□□□□ -0.73
SPEN-201ENST00000375759 INO80BQ9C086 356 aaPredicted RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 CYP21A2P08686 494 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 OSBPL9Q96SU4 736 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 KDM5CP41229 1560 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 PPIP5K2O43314 1243 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 TAF1DQ9H5J8 278 aaPredicted RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 ZNF212Q9UDV6 495 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 ADAMTS1Q9UHI8 967 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 PRPF3O43395 683 aaKnown RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 PMS2P54278 862 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 TTLL11Q8NHH1 800 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 ATP6V1G3Q96LB4 118 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 MAGED2Q9UNF1 606 aaPredicted RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 SH2B2O14492 632 aaPredicted RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 SH3GLB2Q9NR46 395 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 BATF3Q9NR55 127 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 ZRANB2O95218 330 aaKnown RBP eCLIP10.51□□□□□ -0.732e-12■■■□□ 17.1
SPEN-201ENST00000375759 DDIT3P35638 169 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 CNGA3Q16281 694 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 SLFN12LQ6IEE8 588 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 ADD3Q9UEY8 706 aaKnown RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 ATP7AQ04656 1500 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 LGALS16A8MUM7 142 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 FOXP2O15409 715 aa10.51□□□□□ -0.73
SPEN-201ENST00000375759 IRX1P78414 480 aaPredicted RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 G3BP2Q9UN86 482 aaKnown RBP10.51□□□□□ -0.73
SPEN-201ENST00000375759 SLC4A1P02730 911 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 RESTQ13127 1097 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 ETNK1Q9HBU6 452 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 CDV3Q9UKY7 258 aaKnown RBP10.5□□□□□ -0.73
SPEN-201ENST00000375759 EFCAB14O75071 495 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 CCND2P30279 289 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 LLGL1Q15334 1064 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 PAGR1Q9BTK6 254 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 KIF9Q9HAQ2 790 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 SHROOM2Q13796 1616 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 STXBP3O00186 592 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 GGPS1O95749 300 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 CALB1P05937 261 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 RAD23BP54727 409 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 ANAPC7Q9UJX3 599 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 H0Y626 953 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 SNX2O60749 519 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 DIAPH2O60879 1101 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 TRIM16O95361 564 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 CIITAP33076 1130 aa10.5□□□□□ -0.73
SPEN-201ENST00000375759 AP1B1Q10567 949 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms