RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 FBXW10Q5XX13 1052 aa15.33■□□□□ 0.05
MSH5-202ENST00000375740 C1orf186Q6ZWK4 172 aa15.33■□□□□ 0.05
MSH5-202ENST00000375740 MSL3Q8N5Y2 521 aaKnown RBP15.33■□□□□ 0.05
MSH5-202ENST00000375740 UNC45AQ9H3U1 944 aa15.33■□□□□ 0.05
MSH5-202ENST00000375740 SAR1BQ9Y6B6 198 aa15.33■□□□□ 0.05
MSH5-202ENST00000375740 USO1O60763 962 aaKnown RBP15.33■□□□□ 0.04
MSH5-202ENST00000375740 SRGAP2O75044 1071 aa15.33■□□□□ 0.04
MSH5-202ENST00000375740 ICAM1P05362 532 aa15.33■□□□□ 0.04
MSH5-202ENST00000375740 KCNA1Q09470 495 aa15.33■□□□□ 0.04
MSH5-202ENST00000375740 HGSNATQ68CP4 663 aa15.33■□□□□ 0.04
MSH5-202ENST00000375740 TEPSINQ96N21 525 aa15.33■□□□□ 0.04
MSH5-202ENST00000375740 TSGA10Q9BZW7 698 aa15.33■□□□□ 0.04
MSH5-202ENST00000375740 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
MSH5-202ENST00000375740 A0A087WUV0 522 aaPredicted RBP15.32■□□□□ 0.04
MSH5-202ENST00000375740 HSD17B4P51659 736 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 TGFB2P61812 414 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 BMT2Q1RMZ1 405 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 ASTE1Q2TB18 679 aaPredicted RBP15.32■□□□□ 0.04
MSH5-202ENST00000375740 DALRD3Q5D0E6 543 aaKnown RBP15.32■□□□□ 0.04
MSH5-202ENST00000375740 SFMBT2Q5VUG0 894 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 ARHGAP27Q6ZUM4 889 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 FRMD5Q7Z6J6 570 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
MSH5-202ENST00000375740 AFAP1L1Q8TED9 768 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 DEFB129Q9H1M3 183 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 WRAP73Q9P2S5 460 aaPredicted RBP15.32■□□□□ 0.04
MSH5-202ENST00000375740 ARMCX3Q9UH62 379 aaPredicted RBP15.32■□□□□ 0.04
MSH5-202ENST00000375740 POTEB2H3BUK9 544 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 TLR2O60603 784 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 ZBTB7AO95365 584 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
MSH5-202ENST00000375740 GAP43P17677 238 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 EPS15P42566 896 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 MAGEA1P43355 309 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 TUBB4BP68371 445 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 DGKZQ13574 1117 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 TNIP1Q15025 636 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 MYCT1Q8N699 235 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 HOOK2Q96ED9 719 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 MXRA8Q9BRK3 442 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 WDR11Q9BZH6 1224 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 TYW1Q9NV66 732 aaKnown RBP15.32■□□□□ 0.04
MSH5-202ENST00000375740 COL20A1Q9P218 1284 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 ATAD5Q96QE3 1844 aa15.32■□□□□ 0.04
MSH5-202ENST00000375740 NFIBO00712 420 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 ASTN1O14525 1302 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 ZMYND10O75800 440 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 FAM13AO94988 1023 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 NR3C1P04150 777 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 ITGB5P18084 799 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 NMT1P30419 496 aaKnown RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 CCT5P48643 541 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 GFPT1Q06210 699 aaPredicted RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 EPHA7Q15375 998 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 SWT1Q5T5J6 900 aaKnown RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 KCNV1Q6PIU1 500 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 CPXCR1Q8N123 301 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 CLEC4DQ8WXI8 215 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 NACC1Q96RE7 527 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 TEKT3Q9BXF9 490 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 NUCKS1Q9H1E3 243 aaKnown RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 CXorf56Q9H5V9 222 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 OLFML3Q9NRN5 406 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 SSU72P8A0A1W2PR75 194 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 IPO5O00410 1097 aaKnown RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 CLIC2O15247 247 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 AKAP3O75969 853 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 GSCP56915 257 aaPredicted RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 SETQ01105 290 aaPredicted RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 SYN2Q92777 582 aaPredicted RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 HINFPQ9BQA5 517 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
MSH5-202ENST00000375740 ZC3H4Q9UPT8 1303 aaKnown RBP15.31■□□□□ 0.04
MSH5-202ENST00000375740 DDX39AO00148 427 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 WDR46O15213 610 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 CASP4P49662 377 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 ZNF280AP59817 542 aaPredicted RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 SLC9C1Q4G0N8 1177 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 TDRD12Q587J7 1177 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 B3GNT9Q6UX72 402 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 MED4Q9NPJ6 270 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 RBBP6Q7Z6E9 1792 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 TGFB1I1O43294 461 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 ERLIN2O94905 339 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 MOCS3O95396 460 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 SERPING1P05155 500 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 RPL13P26373 211 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 HNRNPH1P31943 449 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 ZC2HC1CQ53FD0 456 aaPredicted RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 GSPT2Q8IYD1 628 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 CAPZA3Q96KX2 299 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 MMS19Q96T76 1030 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 GANQ9H2C0 597 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 RAVER2Q9HCJ3 691 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 PKD2L1Q9P0L9 805 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 ASTN2O75129 1339 aaPredicted RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 ANO9A1A5B4 782 aa15.3■□□□□ 0.04
MSH5-202ENST00000375740 AFPP02771 609 aaKnown RBP15.3■□□□□ 0.04
MSH5-202ENST00000375740 ACTN1P12814 892 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms