RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 LMTK3Q96Q04 1460 aa22.77■■□□□ 1.24
TGFBR1-202ENST00000374994 ESRRGP62508 458 aa22.77■■□□□ 1.24
TGFBR1-202ENST00000374994 BASP1P80723 227 aaKnown RBP22.77■■□□□ 1.24
TGFBR1-202ENST00000374994 ZNF609O15014 1411 aa22.77■■□□□ 1.23
TGFBR1-202ENST00000374994 EIF3HO15372 352 aaKnown RBP eCLIP22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 TAB3Q8N5C8 712 aaPredicted RBP22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 SDCCAG3Q96C92 435 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 EPN3Q9H201 632 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 SEL1LQ9UBV2 794 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 ZCCHC11Q5TAX3 1644 aaKnown RBP22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 KNOP1Q1ED39 458 aaKnown RBP22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 ZBTB5O15062 677 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 PFDN6O15212 129 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 ARL4CP56559 192 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 ST13P4Q8IZP2 240 aaPredicted RBP22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 STK32BQ9NY57 414 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 TTLL3Q9Y4R7 772 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 DEUP1Q05D60 604 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 PRPSAP1Q14558 356 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 ZNF449Q6P9G9 518 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 PCGF5Q86SE9 256 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 FAM160B2Q86V87 743 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 SAAL1Q96ER3 474 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 PI4KBQ9UBF8 816 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 NCK2O43639 380 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 FMR1Q06787 632 aaKnown RBP eCLIP22.76■■□□□ 1.232e-7■■■□□ 14.9
TGFBR1-202ENST00000374994 RFFLQ8WZ73 363 aa22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 DDX47Q9H0S4 455 aaKnown RBP22.76■■□□□ 1.23
TGFBR1-202ENST00000374994 FOXO4P98177 505 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 BYSLQ13895 437 aaKnown RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 TRIP13Q15645 432 aaPredicted RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 BBS9Q3SYG4 887 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 SFR1Q86XK3 245 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 FOXP4Q8IVH2 680 aaPredicted RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 PIGBQ92521 554 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 DCP1AQ9NPI6 582 aaPredicted RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 PACSIN2Q9UNF0 486 aaPredicted RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 ESYT3A0FGR9 886 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 SRGAP2BP0DMP2 458 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 MDH1P40925 334 aaKnown RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 NME8Q8N427 588 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 PROCA1Q8NCQ7 364 aaPredicted RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 KLC4Q9NSK0 619 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 IPO11Q9UI26 975 aaKnown RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 NPHP4O75161 1426 aaPredicted RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 POTEMA6NI47 508 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 RASA4BC9J798 803 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 RASA4O43374 803 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 STX1BP61266 288 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 CEP170P1Q96L14 293 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 CENPKQ9BS16 269 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 KIF1CO43896 1103 aaKnown RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 STAT2P52630 851 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 DARS2Q6PI48 645 aaKnown RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 STAG2Q8N3U4 1231 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 KLHL38Q2WGJ6 581 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 CC2D2BQ6DHV5 1058 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 ATG9AQ7Z3C6 839 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 TSC22D3Q99576 134 aa22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 NOC2LQ9Y3T9 749 aaKnown RBP22.75■■□□□ 1.23
TGFBR1-202ENST00000374994 PFDN1O60925 122 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 PPFIA2O75334 1257 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 ZRANB2O95218 330 aaKnown RBP eCLIP22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 SEPT9Q9UHD8 586 aaPredicted RBP22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 QRICH2Q9H0J4 1663 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 SLFN12LQ6IEE8 588 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 SUGCTQ9HAC7 445 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 CNOT8Q9UFF9 292 aaKnown RBP22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 TULP4Q9NRJ4 1543 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 LRRC1Q9BTT6 524 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 FBXL5Q9UKA1 691 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 PLA2G12BQ9BX93 195 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 IRX2Q9BZI1 471 aaPredicted RBP22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 KIAA1586Q9HCI6 787 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 SAYSD1Q9NPB0 183 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 ECE1P42892 770 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 PDIA5Q14554 519 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 FRMD5Q7Z6J6 570 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 ZNF512BQ96KM6 892 aaPredicted RBP22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 WNT8AQ9H1J5 351 aa22.74■■□□□ 1.23
TGFBR1-202ENST00000374994 GSTA1P08263 222 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 GSTA2P09210 222 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 DIXDC1Q155Q3 683 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 METTL13Q8N6R0 699 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 XXYLT1Q8NBI6 393 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 CNKSR1Q969H4 720 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 PHF20Q9BVI0 1012 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 HPCAL4Q9UM19 191 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 GJA3Q9Y6H8 435 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 RHOBTB3O94955 611 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 EPM2AIP1Q7L775 607 aaPredicted RBP22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 NCAPGQ9BPX3 1015 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 GRAPQ13588 217 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 GRAPLQ8TC17 118 aaPredicted RBP22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 ZNF233A6NK53 670 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 DOK7Q18PE1 504 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 MIS18BP1Q6P0N0 1132 aa22.73■■□□□ 1.23
TGFBR1-202ENST00000374994 XPOTO43592 962 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms