RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 ABCB11O95342 1321 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 A6NJR5 290 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 SRGAP2O75044 1071 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 TFAMQ00059 246 aaKnown RBP21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 RNF207Q6ZRF8 634 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 HERC5Q9UII4 1024 aaKnown RBP21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 FEM1BQ9UK73 627 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 TLR3O15455 904 aaKnown RBP21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 SMARCA1P28370 1054 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 TRIM42Q8IWZ5 723 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 TTC16Q8NEE8 873 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 ZNF341Q9BYN7 854 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 TARSL2A2RTX5 802 aaKnown RBP21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 SLC26A4O43511 780 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 KCNQ2O43526 872 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 AKR1B1P15121 316 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 IRX4P78413 519 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 CYP4F22Q6NT55 531 aa21.07■□□□□ 0.96
TGFBR1-201ENST00000374990 SSU72P8A0A1W2PR75 194 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 SORBS3O60504 671 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 P4HBP07237 508 aaKnown RBP21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 FDX1P10109 184 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 GPC5P78333 572 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 ANKRD40Q6AI12 368 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 RBM43Q6ZSC3 357 aaKnown RBP21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 MIGA2Q7L4E1 593 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 FBXO33Q7Z6M2 555 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 FAM205CA6NFA0 338 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 SRGNP10124 158 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 ANXA13P27216 316 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 PDXKO00764 312 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 MCF2LO15068 1137 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 CLTAP09496 248 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 MAP2K2P36507 400 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 USP49Q70CQ1 688 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 FRMD5Q7Z6J6 570 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 MTMR1Q13613 665 aa21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 ACTR5Q9H9F9 607 aaPredicted RBP21.06■□□□□ 0.96
TGFBR1-201ENST00000374990 NTSR2O95665 410 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 KRT1P04264 644 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 GFPT1Q06210 699 aaPredicted RBP21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 RMDN3Q96TC7 470 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 POTEFA5A3E0 1075 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 POTEIP0CG38 1075 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 GPSM2P81274 684 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 MTF1Q14872 753 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 TTBK2Q6IQ55 1244 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 POTEGQ6S5H5 508 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 POTEEQ6S8J3 1075 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 SFNP31947 248 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 CA8P35219 290 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 ZNF543Q08ER8 600 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 SNX1Q13596 522 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 TC2NQ8N9U0 490 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 TTLL3Q9Y4R7 772 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 FCER1AP12319 257 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 TBC1D10BQ4KMP7 808 aaPredicted RBP21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 PDXDC1Q6P996 788 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 QARSP47897 775 aaKnown RBP21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 RUBCNQ92622 972 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 CRAMP1Q96RY5 1269 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 MAD1L1Q9Y6D9 718 aa21.05■□□□□ 0.96
TGFBR1-201ENST00000374990 GOLGA8SH3BPF8 625 aa21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 LRRD1A4D1F6 860 aa21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 TROAPQ12815 778 aa21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 SEPT14Q6ZU15 432 aa21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 RFX6Q8HWS3 928 aa21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 NOL3O60936 208 aaKnown RBP21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 HNRNPH2P55795 449 aaKnown RBP21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 COG1Q8WTW3 980 aa21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.04■□□□□ 0.963e-6■■■■■ 50.8
TGFBR1-201ENST00000374990 PFASO15067 1338 aa21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 ZRANB2O95218 330 aaKnown RBP eCLIP21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 PRPF38AQ8NAV1 312 aaKnown RBP21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 GIMAP8Q8ND71 665 aaPredicted RBP21.04■□□□□ 0.96
TGFBR1-201ENST00000374990 PROCA1Q8NCQ7 364 aaPredicted RBP21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 MORC4Q8TE76 937 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 AGXT2Q9BYV1 514 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 LCMT1Q9UIC8 334 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 TBX3O15119 743 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 CEP170BQ9Y4F5 1589 aaPredicted RBP21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 GOLGA8IPA6NC78 632 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 GOLGA8JA6NMD2 632 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 EYA4O95677 639 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 FXR1P51114 621 aaKnown RBP eCLIP21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 PDIK1LQ8N165 341 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 CNOT8Q9UFF9 292 aaKnown RBP21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 FBXO40Q9UH90 709 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 SPATA4Q8NEY3 305 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 SLITRK6Q9H5Y7 841 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 ESYT2A0FGR8 921 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 IPO5O00410 1097 aaKnown RBP21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 GARSP41250 739 aaKnown RBP21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 IGBP1P78318 339 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 SNCBQ16143 134 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 DYDC2Q96IM9 177 aa21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 NXF1Q9UBU9 619 aaKnown RBP21.03■□□□□ 0.96
TGFBR1-201ENST00000374990 TPD52P55327 224 aaPredicted RBP21.02■□□□□ 0.96
TGFBR1-201ENST00000374990 SNAP25P60880 206 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms