RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 LPAL2Q16609 132 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 DCLRE1AQ6PJP8 1040 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 KCNT2Q6UVM3 1135 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 PRR23CQ6ZRP0 262 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 GPR149Q86SP6 731 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 TRMT2AQ8IZ69 625 aaKnown RBP11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 IFNL3Q8IZI9 196 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 DOCK8Q8NF50 2099 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 TUBE1Q9UJT0 475 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 SQORQ9Y6N5 450 aa11.73□□□□□ -0.53
HLA-DRA-201ENST00000374982 IGSF9BQ9UPX0 1349 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 MGEA5O60502 916 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 TGFB3P10600 412 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 HSPD1P10809 573 aaKnown RBP11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 FGFR1P11362 822 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 STARD6P59095 220 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 ZNF543Q08ER8 600 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 PTPN14Q15678 1187 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 LETM2Q2VYF4 491 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 UTP14CQ5TAP6 766 aaKnown RBP11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 TSSK4Q6SA08 328 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 CABP7Q86V35 215 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 MCF2L2Q86YR7 1114 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 IL31RAQ8NI17 732 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 FRAT1Q92837 279 aaPredicted RBP11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 ZNF558Q96NG5 402 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 PDCD2LQ9BRP1 358 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 BCO2Q9BYV7 579 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 SFXN1Q9H9B4 322 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 SEMA4GQ9NTN9 838 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 TELO2Q9Y4R8 837 aa11.72□□□□□ -0.53
HLA-DRA-201ENST00000374982 MBLAC1A4D2B0 266 aaPredicted RBP11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 PATL2C9JE40 543 aaKnown RBP11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 IPO8O15397 1037 aaKnown RBP11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 LRP3O75074 770 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 GNAT2P19087 354 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 PPM1AP35813 382 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 TMEM266Q2M3C6 531 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 IL31Q6EBC2 164 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 LAIR1Q6GTX8 287 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 CEP85Q6P2H3 762 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 SLC22A17Q8WUG5 538 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 APPBP2Q92624 585 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 TMEM47Q9BQJ4 181 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 SPG21Q9NZD8 308 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
HLA-DRA-201ENST00000374982 ASH1LQ9NR48 2969 aaKnown RBP11.71□□□□□ -0.54
HLA-DRA-201ENST00000374982 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 M0R2C6 588 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 RANBP6O60518 1105 aaKnown RBP11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 CXCL14O95715 111 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 CFBP00751 764 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 TOP1P11387 765 aaKnown RBP11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 GBP2P32456 591 aaPredicted RBP11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 TMEM62Q0P6H9 643 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 PPFIA1Q13136 1202 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 PGM5Q15124 567 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 GRIK4Q16099 956 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 CSRP2Q16527 193 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 CDC37Q16543 378 aaPredicted RBP11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 MARCH8Q5T0T0 291 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 IER5Q5VY09 327 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 LRRC55Q6ZSA7 311 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 AUTS2Q8WXX7 1259 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 GLG1Q92896 1179 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 ZBTB10Q96DT7 871 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 TMEM121BQ9BXQ6 578 aaPredicted RBP11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 FAM49AQ9H0Q0 323 aaPredicted RBP11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 RAB23Q9ULC3 237 aa11.7□□□□□ -0.54
HLA-DRA-201ENST00000374982 CNOT1A5YKK6 2376 aaKnown RBP11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 GREB1Q4ZG55 1949 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 KANSL1LA0AUZ9 987 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 C9IYK1 514 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 M0QZ92 97 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 RETP07949 1114 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 NFX1Q12986 1120 aaKnown RBP11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 METTL7BQ6UX53 244 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 CYFIP1Q7L576 1253 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 VSIG10LQ86VR7 867 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 SHDQ96IW2 340 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 ADAM2Q99965 735 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 NAPBQ9H115 298 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 SLC2A4RGQ9NR83 387 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 EPS15L1Q9UBC2 864 aa11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 MTF2Q9Y483 593 aaPredicted RBP11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 FLNBO75369 2602 aaKnown RBP11.69□□□□□ -0.54
HLA-DRA-201ENST00000374982 ADAMTS20P59510 1910 aa11.68□□□□□ -0.54
HLA-DRA-201ENST00000374982 DENND3A2RUS2 1198 aa11.68□□□□□ -0.54
HLA-DRA-201ENST00000374982 TMEM8BA6NDV4 472 aa11.68□□□□□ -0.54
HLA-DRA-201ENST00000374982 OPLAHO14841 1288 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms