RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 KIAA0355O15063 1070 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
HSPG2-202ENST00000374676 NCLP19338 710 aaKnown RBP12.7□□□□□ -0.38
HSPG2-202ENST00000374676 KLRC1P26715 233 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 IGBP1P78318 339 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 ECM1Q16610 540 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 TAF2Q6P1X5 1199 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 MTHFD1LQ6UB35 978 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 RPAINQ86UA6 219 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 CABP7Q86V35 215 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 EXOC8Q8IYI6 725 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 CHAMP1Q96JM3 812 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 PNMA5Q96PV4 448 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 PDLIM7Q9NR12 457 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 CYP26B1Q9NR63 512 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 TMEM39AQ9NV64 488 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-202ENST00000374676 TUBE1Q9UJT0 475 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 DBR1Q9UK59 544 aaKnown RBP12.7□□□□□ -0.38
HSPG2-202ENST00000374676 PCDHA7Q9UN72 937 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 KIAA1024Q9UPX6 916 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 PCDHA2Q9Y5H9 948 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 NR2E3Q9Y5X4 410 aa12.7□□□□□ -0.38
HSPG2-202ENST00000374676 ARID2Q68CP9 1835 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 IGKV6-21A0A0C4DH24 114 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 SMIM35A0A1B0GVV1 85 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 ZBTB39O15060 712 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 C22orf31O95567 290 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 CYP2C9P11712 490 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 ME1P48163 572 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 NPEPPSP55786 919 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-202ENST00000374676 RBL2Q08999 1139 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 TBC1D8BQ0IIM8 1120 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 MTERF2Q49AM1 385 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 XKR9Q5GH70 373 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 POTEGQ6S5H5 508 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 TRMT1LQ7Z2T5 733 aaKnown RBP12.69□□□□□ -0.38
HSPG2-202ENST00000374676 C7orf61Q8IZ16 206 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 CCDC155Q8N6L0 562 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 CAGE1Q8TC20 777 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 PIGOQ8TEQ8 1089 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 TRAPPC12Q8WVT3 735 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 CALML4Q96GE6 196 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 EPSTI1Q96J88 318 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 CEP170P1Q96L14 293 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 JPH2Q9BR39 696 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-202ENST00000374676 NOC4LQ9BVI4 516 aaKnown RBP12.69□□□□□ -0.38
HSPG2-202ENST00000374676 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
HSPG2-202ENST00000374676 DNM3Q9UQ16 869 aa12.69□□□□□ -0.38
HSPG2-202ENST00000374676 TMEM150BA6NC51 233 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 TRIM43BA6NCK2 446 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 CAND2O75155 1236 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 MAFO75444 373 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-202ENST00000374676 EYA4O95677 639 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 RFC5P40937 340 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 RARRES1P49788 294 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 GRB10Q13322 594 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 BFSP2Q13515 415 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 TRIM71Q2Q1W2 868 aaKnown RBP12.68□□□□□ -0.38
HSPG2-202ENST00000374676 TMEM119Q4V9L6 283 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 SPECC1Q5M775 1068 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 PLA2G4FQ68DD2 849 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 ADALQ6DHV7 355 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 USP49Q70CQ1 688 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 SH3RF1Q7Z6J0 888 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 NME8Q8N427 588 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 LINC01465Q8N7H1 131 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 DHX38Q92620 1227 aaKnown RBP12.68□□□□□ -0.38
HSPG2-202ENST00000374676 SYMPKQ92797 1274 aaKnown RBP12.68□□□□□ -0.38
HSPG2-202ENST00000374676 TRIM43Q96BQ3 446 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-202ENST00000374676 CDK5RAP3Q96JB5 506 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 DHX33Q9H6R0 707 aaKnown RBP12.68□□□□□ -0.38
HSPG2-202ENST00000374676 CCDC39Q9UFE4 941 aa12.68□□□□□ -0.38
HSPG2-202ENST00000374676 A0A087WWV3 80 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 E9PMD0 336 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 DGAT1O75907 488 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 TIMP1P01033 207 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 TMOD1P28289 359 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 TXLNAP40222 546 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 ZRSR1Q15695 479 aaKnown RBP12.67□□□□□ -0.38
HSPG2-202ENST00000374676 EFCAB12Q6NXP0 572 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 SHC4Q6S5L8 630 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 RUFY4Q6ZNE9 571 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 RSPH3Q86UC2 560 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 KIAA0319LQ8IZA0 1049 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 ZNF710Q8N1W2 664 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 WNT8BQ93098 351 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 SH2D3AQ9BRG2 576 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 HIPK3Q9H422 1215 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 PRKAG2Q9UGJ0 569 aa12.67□□□□□ -0.38
HSPG2-202ENST00000374676 A0A1W2PQ27 194 aa12.66□□□□□ -0.38
HSPG2-202ENST00000374676 A0A1W2PQ64 194 aa12.66□□□□□ -0.38
HSPG2-202ENST00000374676 A0A1W2PQD8 194 aa12.66□□□□□ -0.38
HSPG2-202ENST00000374676 GAS2O43903 313 aaKnown RBP12.66□□□□□ -0.38
HSPG2-202ENST00000374676 CKBP12277 381 aa12.66□□□□□ -0.38
HSPG2-202ENST00000374676 RAG1P15918 1043 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms