RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 MTHFD1LQ6UB35 978 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 CABP7Q86V35 215 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 EXOC8Q8IYI6 725 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 CAGE1Q8TC20 777 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 JPH2Q9BR39 696 aaPredicted RBP17.02■□□□□ 0.32
PFDN6-202ENST00000374607 NT5C3AQ9H0P0 336 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 FAM49AQ9H0Q0 323 aaPredicted RBP17.02■□□□□ 0.32
PFDN6-202ENST00000374607 CSRNP2Q9H175 543 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 SUGCTQ9HAC7 445 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 KIAA1024Q9UPX6 916 aa17.02■□□□□ 0.32
PFDN6-202ENST00000374607 KAT6AQ92794 2004 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 PPP6R2O75170 966 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 MUTP22033 750 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 DNM2P50570 870 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 POLGP54098 1239 aaPredicted RBP17.01■□□□□ 0.31
PFDN6-202ENST00000374607 POTEGQ6S5H5 508 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 ANO5Q75V66 913 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 SH3RF1Q7Z6J0 888 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 PIGOQ8TEQ8 1089 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 SLC7A3Q8WY07 619 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 SH2D3AQ9BRG2 576 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 NIFKQ9BYG3 293 aaKnown RBP17.01■□□□□ 0.31
PFDN6-202ENST00000374607 SCAND2PQ9GZW5 306 aaPredicted RBP17.01■□□□□ 0.31
PFDN6-202ENST00000374607 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 ANKEF1Q9NU02 776 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 DDX19AQ9NUU7 478 aaKnown RBP17.01■□□□□ 0.31
PFDN6-202ENST00000374607 WRAP73Q9P2S5 460 aaPredicted RBP17.01■□□□□ 0.31
PFDN6-202ENST00000374607 CCDC39Q9UFE4 941 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 FBXO2Q9UK22 296 aaPredicted RBP17.01■□□□□ 0.31
PFDN6-202ENST00000374607 DNM3Q9UQ16 869 aa17.01■□□□□ 0.31
PFDN6-202ENST00000374607 ARHGEF35A5YM69 484 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 TMEM150BA6NC51 233 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 TRIM43BA6NCK2 446 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 KIAA0355O15063 1070 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 LYPLA2O95372 231 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 TIMP1P01033 207 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 RPLP2P05387 115 aaKnown RBP17■□□□□ 0.31
PFDN6-202ENST00000374607 SPATA31C1P0DKV0 1188 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 DDIT3P35638 169 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 HIC1Q14526 733 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 SPECC1Q5M775 1068 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 EFCAB12Q6NXP0 572 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 SERINC5Q86VE9 423 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 TMEM199Q8N511 208 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 TRIM43Q96BQ3 446 aaPredicted RBP17■□□□□ 0.31
PFDN6-202ENST00000374607 CLIC6Q96NY7 704 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 MAP7D2Q96T17 732 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 PLIN2Q99541 437 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 PPME1Q9Y570 386 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 PCDHA2Q9Y5H9 948 aa17■□□□□ 0.31
PFDN6-202ENST00000374607 A0A087WWV3 80 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 ZBTB39O15060 712 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 CUTAO60888 179 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 XRCC6P12956 609 aaKnown RBP eCLIP16.99■□□□□ 0.31
PFDN6-202ENST00000374607 HOXC8P31273 242 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 CYP2C18P33260 490 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 CCL23P55773 120 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 NPEPPSP55786 919 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 GRIN1Q05586 938 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 MARCH8Q5T0T0 291 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 RUFY4Q6ZNE9 571 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 DNAJB3Q8WWF6 145 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 ZBTB10Q96DT7 871 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 SCLT1Q96NL6 688 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 NOC4LQ9BVI4 516 aaKnown RBP16.99■□□□□ 0.31
PFDN6-202ENST00000374607 BMP2KQ9NSY1 1161 aaPredicted RBP16.99■□□□□ 0.31
PFDN6-202ENST00000374607 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 AKT3Q9Y243 479 aa16.99■□□□□ 0.31
PFDN6-202ENST00000374607 ALPK3Q96L96 1907 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 SMIM35A0A1B0GVV1 85 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 MBLAC1A4D2B0 266 aaPredicted RBP16.98■□□□□ 0.31
PFDN6-202ENST00000374607 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 SLC26A4O43511 780 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 C22orf31O95567 290 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
PFDN6-202ENST00000374607 CTSHP09668 335 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 CKBP12277 381 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 RFC5P40937 340 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 ADAM17P78536 824 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
PFDN6-202ENST00000374607 IER5Q5VY09 327 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 NME8Q8N427 588 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 SYMPKQ92797 1274 aaKnown RBP16.98■□□□□ 0.31
PFDN6-202ENST00000374607 BADQ92934 168 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 FAM13BQ9NYF5 915 aa16.98■□□□□ 0.31
PFDN6-202ENST00000374607 MORC2Q9Y6X9 1032 aaPredicted RBP16.98■□□□□ 0.31
PFDN6-202ENST00000374607 GOLGA6L4A6NEF3 574 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 RSPH10B2B2RC85 870 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 ZBTB42B2RXF5 422 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 H0YGN5 161 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 CAND2O75155 1236 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 RSPH10BP0C881 870 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 SELPP16109 830 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 CLCN3P51790 818 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 TMEM62Q0P6H9 643 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 CSPP1Q1MSJ5 1256 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 RRAGBQ5VZM2 374 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 LRRC8DQ7L1W4 858 aa16.97■□□□□ 0.31
PFDN6-202ENST00000374607 LRRC71Q8N4P6 559 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms