RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 WASHC2DQ5SRD0 308 aa11□□□□□ -0.65
CD28-202ENST00000374481 AKNAD1Q5T1N1 836 aa11□□□□□ -0.65
CD28-202ENST00000374481 ERMNQ8TAM6 284 aa11□□□□□ -0.65
CD28-202ENST00000374481 PPP4R1Q8TF05 950 aa11□□□□□ -0.65
CD28-202ENST00000374481 PPWD1Q96BP3 646 aaKnown RBP11□□□□□ -0.65
CD28-202ENST00000374481 ABHD8Q96I13 439 aa11□□□□□ -0.65
CD28-202ENST00000374481 TRIM51Q9BSJ1 452 aa11□□□□□ -0.65
CD28-202ENST00000374481 EYA2O00167 538 aa11□□□□□ -0.65
CD28-202ENST00000374481 ZNF18P17022 549 aa11□□□□□ -0.65
CD28-202ENST00000374481 GNA11P29992 359 aa11□□□□□ -0.65
CD28-202ENST00000374481 TRIP10Q15642 601 aa11□□□□□ -0.65
CD28-202ENST00000374481 CNGA3Q16281 694 aa11□□□□□ -0.65
CD28-202ENST00000374481 IZUMO2Q6UXV1 221 aa11□□□□□ -0.65
CD28-202ENST00000374481 SPATA17Q96L03 361 aa11□□□□□ -0.65
CD28-202ENST00000374481 CYP39A1Q9NYL5 469 aa11□□□□□ -0.65
CD28-202ENST00000374481 ATP11BQ9Y2G3 1177 aa11□□□□□ -0.65
CD28-202ENST00000374481 TACC3Q9Y6A5 838 aa11□□□□□ -0.65
CD28-202ENST00000374481 TRPM2O94759 1503 aa11□□□□□ -0.65
CD28-202ENST00000374481 CDC42BPBQ9Y5S2 1711 aa11□□□□□ -0.65
CD28-202ENST00000374481 VIRMAQ69YN4 1812 aaKnown RBP11□□□□□ -0.65
CD28-202ENST00000374481 CCNT1O60563 726 aaKnown RBP11□□□□□ -0.65
CD28-202ENST00000374481 RAPGEF3O95398 923 aa11□□□□□ -0.65
CD28-202ENST00000374481 IFNAR1P17181 557 aa11□□□□□ -0.65
CD28-202ENST00000374481 CYP7A1P22680 504 aa11□□□□□ -0.65
CD28-202ENST00000374481 PPIDQ08752 370 aaKnown RBP11□□□□□ -0.65
CD28-202ENST00000374481 ZNF844Q08AG5 666 aa11□□□□□ -0.65
CD28-202ENST00000374481 SLC29A2Q14542 456 aa11□□□□□ -0.65
CD28-202ENST00000374481 SGO2Q562F6 1265 aa11□□□□□ -0.65
CD28-202ENST00000374481 TMCO5AQ8N6Q1 288 aa11□□□□□ -0.65
CD28-202ENST00000374481 MAGEB6Q8N7X4 407 aa11□□□□□ -0.65
CD28-202ENST00000374481 MTBPQ96DY7 904 aa11□□□□□ -0.65
CD28-202ENST00000374481 OLFML3Q9NRN5 406 aa11□□□□□ -0.65
CD28-202ENST00000374481 PCDHGC5Q9Y5F6 944 aa11□□□□□ -0.65
CD28-202ENST00000374481 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
CD28-202ENST00000374481 MAST3O60307 1309 aa11□□□□□ -0.65
CD28-202ENST00000374481 AGPSO00116 658 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 PDE2AO00408 941 aaPredicted RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 WDR46O15213 610 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 ESRRBO95718 433 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 PTDSS1P48651 473 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 NR1H3Q13133 447 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 LACTB2Q53H82 288 aaPredicted RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 PATL1Q86TB9 770 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 CCDC124Q96CT7 223 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 FAM81BQ96LP2 452 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 NLRP3Q96P20 1036 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 ZNF287Q9HBT7 754 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 UBN1Q9NPG3 1134 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 CDC27P30260 824 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 HERVK_113P62684 666 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 MDM2Q00987 491 aaPredicted RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 LONRF1Q17RB8 773 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 EXOC3L4Q17RC7 722 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 TRIM67Q6ZTA4 783 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 ZNF554Q86TJ5 538 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 MYL1P05976 194 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 MAN1A1P33908 653 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 EIF2B2P49770 351 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 MTTPP55157 894 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 TRIP13Q15645 432 aaPredicted RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 QPCTQ16769 361 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 RBM12BQ8IXT5 1001 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 MIGA1Q8NAN2 632 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 ATP11CQ8NB49 1132 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 GPR101Q96P66 508 aaPredicted RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 CRNKL1Q9BZJ0 848 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 C10orf88Q9H8K7 445 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 SH3TC1Q8TE82 1336 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 CLPTM1O96005 669 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 ETS2P15036 469 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 SP100P23497 879 aaPredicted RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 FKBP3Q00688 224 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 LBRQ14739 615 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 CD302Q8IX05 232 aa10.99□□□□□ -0.65
CD28-202ENST00000374481 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
CD28-202ENST00000374481 NPATQ14207 1427 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 P4HA2O15460 535 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 CTDNEP1O95476 244 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 TSPY3P0CV98 308 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 TSPY8P0CW00 308 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 PAX3P23760 479 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 RGS2P41220 211 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 USP46P62068 366 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 TSPY1Q01534 308 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 SLC34A1Q06495 639 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 MPP3Q13368 585 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 IDI1Q13907 227 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 COL23A1Q86Y22 540 aaPredicted RBP10.98□□□□□ -0.65
CD28-202ENST00000374481 LENG1Q96BZ8 264 aaPredicted RBP10.98□□□□□ -0.65
CD28-202ENST00000374481 ZWILCHQ9H900 591 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 EPS15L1Q9UBC2 864 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 GRIN2DO15399 1336 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 SRGNP10124 158 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 DRD4P21917 467 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 AP1B1Q10567 949 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
CD28-202ENST00000374481 PABPC3Q9H361 631 aaKnown RBP10.98□□□□□ -0.65
CD28-202ENST00000374481 NPHS2Q9NP85 383 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms