RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 PRKCEQ02156 737 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 CRHR2Q13324 411 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 KRT31Q15323 416 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 BMT2Q1RMZ1 405 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 TCP11X2Q5H9J9 407 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 KCNV1Q6PIU1 500 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 TRMT1LQ7Z2T5 733 aaKnown RBP17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 EEF2KMTQ96G04 330 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 THAP9Q9H5L6 903 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 PDLIM7Q9NR12 457 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 USO1O60763 962 aaKnown RBP17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 CTGFP29279 349 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 HSDL1Q3SXM5 330 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 XKR9Q5GH70 373 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 CSGALNACT2Q8N6G5 542 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 USP6NLQ92738 828 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 CEP89Q96ST8 783 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 GPR20Q99678 358 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 STRA6Q9BX79 667 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 PARVGQ9HBI0 331 aa17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.38■□□□□ 0.37
NIPAL3-204ENST00000374399 ZSWIM8A7E2V4 1837 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 MGAMO43451 1857 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 KCNJ18B7U540 433 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 TEX33O43247 280 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 PRPF6O94906 941 aaKnown RBP17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 FAM13AO94988 1023 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 NMT1P30419 496 aaKnown RBP17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 LRRC63Q05C16 580 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 KCNA1Q09470 495 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 SREBF2Q12772 1141 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 KCNJ12Q14500 433 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 TPD52L1Q16890 204 aaPredicted RBP17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 DPP9Q86TI2 863 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 NELFCDQ8IXH7 590 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 MYCT1Q8N699 235 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 ZNF507Q8TCN5 953 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 ZNF302Q9NR11 478 aa17.37■□□□□ 0.37
NIPAL3-204ENST00000374399 PPP1R37O75864 691 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 ECM2O94769 699 aaPredicted RBP17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 TXNP10599 105 aaKnown RBP17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 TCF7P36402 384 aaPredicted RBP17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 MAEAQ7L5Y9 396 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 ZNF720Q7Z2F6 126 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 CCDC186Q7Z3E2 898 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 VSTM4Q8IW00 320 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 ZC3H3Q8IXZ2 948 aaKnown RBP17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 AFAP1L1Q8TED9 768 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 SCFD2Q8WU76 684 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 SEPT1Q8WYJ6 367 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 ZNF830Q96NB3 372 aaPredicted RBP17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 KCNF1Q9H3M0 494 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 MRPL44Q9H9J2 332 aaKnown RBP17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 MLXIPQ9HAP2 919 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 ZFYVE28Q9HCC9 887 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 VTA1Q9NP79 307 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 GPRC5CQ9NQ84 441 aa17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 RTN4Q9NQC3 1192 aaKnown RBP17.36■□□□□ 0.37
NIPAL3-204ENST00000374399 CBFA2T2O43439 604 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 DKC1O60832 514 aaKnown RBP eCLIP17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 LGR5O75473 907 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 IGHA2P01877 340 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 PBX1P40424 430 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 ARHGAP1Q07960 439 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 TTLL4Q14679 1199 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 ARID5BQ14865 1188 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 ZC2HC1CQ53FD0 456 aaPredicted RBP17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 XKR3Q5GH77 459 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 GJC2Q5T442 439 aaPredicted RBP17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 DRC7Q8IY82 874 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 TRIM44Q96DX7 344 aaPredicted RBP17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 TINF2Q9BSI4 451 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 IKZF4Q9H2S9 585 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 XPNPEP1Q9NQW7 623 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 CYP26B1Q9NR63 512 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 FLRT1Q9NZU1 646 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 SEL1LQ9UBV2 794 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 GJD2Q9UKL4 321 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 ZMYM2Q9UBW7 1377 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 OATP04181 439 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 HOXC6P09630 235 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 EEF1GP26641 437 aaKnown RBP17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 COPB1P53618 953 aaKnown RBP17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 SPAG1Q07617 926 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 MAP2K5Q13163 448 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 OTUD6AQ7L8S5 288 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 TMC6Q7Z403 805 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 CEP170P1Q96L14 293 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 TAB2Q9NYJ8 693 aa17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 SEPT9Q9UHD8 586 aaPredicted RBP17.35■□□□□ 0.37
NIPAL3-204ENST00000374399 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 EIF3DO15371 548 aaKnown RBP eCLIP17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 CA12O43570 354 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 GCNT3O95395 438 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 ADCYAP1R1P41586 468 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 SOX10P56693 466 aa17.34■□□□□ 0.37
NIPAL3-204ENST00000374399 TARBP2Q15633 366 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms