RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 FAM76AQ8TAV0 307 aa17.05■□□□□ 0.32
TMEM50A-201ENST00000374358 DYDC2Q96IM9 177 aa17.05■□□□□ 0.32
TMEM50A-201ENST00000374358 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
TMEM50A-201ENST00000374358 NAGPAQ9UK23 515 aa17.05■□□□□ 0.32
TMEM50A-201ENST00000374358 RRP15Q9Y3B9 282 aaKnown RBP17.05■□□□□ 0.32
TMEM50A-201ENST00000374358 ZMYM2Q9UBW7 1377 aa17.05■□□□□ 0.32
TMEM50A-201ENST00000374358 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
TMEM50A-201ENST00000374358 CLRN2A0PK11 232 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 MYO1CO00159 1063 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 HSPA1LP34931 641 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 SRLQ86TD4 932 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 CDAN1Q8IWY9 1227 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 GMCL1P1Q8NEA9 526 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 GMCL1Q96IK5 515 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 ZIM3Q96PE6 472 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 CWC15Q9P013 229 aaKnown RBP17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 TCP10L2B9ZVM9 353 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 RAD51CO43502 376 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 ALKBH5Q6P6C2 394 aaKnown RBP17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 CASKIN2Q8WXE0 1202 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 AP1M1Q9BXS5 423 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 LUC7LQ9NQ29 371 aaKnown RBP17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 TYW1Q9NV66 732 aaKnown RBP17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 TMCO5BA8MYB1 307 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 PDXKO00764 312 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 TBX3O15119 743 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 CALUO43852 315 aaPredicted RBP17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 GFPT2O94808 682 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 RBM26Q5T8P6 1007 aaKnown RBP17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 ARHGAP27Q6ZUM4 889 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 MYCT1Q8N699 235 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 FAM20AQ96MK3 541 aa17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 CCDC43Q96MW1 224 aaKnown RBP17.04■□□□□ 0.32
TMEM50A-201ENST00000374358 HOXA7P31268 230 aaPredicted RBP17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 FEZ2Q9UHY8 353 aaPredicted RBP17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 TSKSQ9UJT2 592 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 SLITRK3O94933 977 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 TRIM49P0CI25 452 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 TRIM49CP0CI26 452 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 EPB41P11171 864 aaKnown RBP17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 PLS1Q14651 629 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 LRCH2Q5VUJ6 765 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 EMBQ6PCB8 327 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 BANK1Q8NDB2 785 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 PKD2L1Q9P0L9 805 aa17.03■□□□□ 0.32
TMEM50A-201ENST00000374358 EYA4O95677 639 aa17.02■□□□□ 0.32
TMEM50A-201ENST00000374358 CIITAP33076 1130 aa17.02■□□□□ 0.32
TMEM50A-201ENST00000374358 CYP2J2P51589 502 aa17.02■□□□□ 0.32
TMEM50A-201ENST00000374358 MAEAQ7L5Y9 396 aa17.02■□□□□ 0.32
TMEM50A-201ENST00000374358 USP38Q8NB14 1042 aa17.02■□□□□ 0.32
TMEM50A-201ENST00000374358 PLCB1Q9NQ66 1216 aa17.02■□□□□ 0.32
TMEM50A-201ENST00000374358 GDF3Q9NR23 364 aa17.02■□□□□ 0.32
TMEM50A-201ENST00000374358 DDX39AO00148 427 aaKnown RBP17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 CEP104O60308 925 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 RPS6KA5O75582 802 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 FAM13AO94988 1023 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 FOSP01100 380 aaPredicted RBP17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 MMP14P50281 582 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 STAT2P52630 851 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 GBP6Q6ZN66 633 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 DDX42Q86XP3 938 aaKnown RBP eCLIP17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 SH3GL2Q99962 352 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 HSD17B14Q9BPX1 270 aa17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 SCAF8Q9UPN6 1271 aaKnown RBP17.02■□□□□ 0.31
TMEM50A-201ENST00000374358 DDX3XO00571 662 aaKnown RBP eCLIP17.01■□□□□ 0.311e-17■■■□□ 15.7
TMEM50A-201ENST00000374358 KIF4AO95239 1232 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 IVLP07476 585 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 RPS6KA1Q15418 735 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 IFT20Q8IY31 132 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 LRRC57Q8N9N7 239 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 RDH13Q8NBN7 331 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 U2AF1L4Q8WU68 220 aaKnown RBP17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 YDJCA8MPS7 323 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 ATP1A2P50993 1020 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 JAM2P57087 298 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 CBWD6Q4V339 395 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 CBWD3Q5JTY5 395 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 CBWD5Q5RIA9 395 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 TRMT1LQ7Z2T5 733 aaKnown RBP17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 CAVIN3Q969G5 261 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 RUFY1Q96T51 708 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 SH2D3AQ9BRG2 576 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 OSGEPQ9NPF4 335 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 FBXO28Q9NVF7 368 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 SERPINA10Q9UK55 444 aa17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 ZNF646O15015 1829 aaPredicted RBP17.01■□□□□ 0.31
TMEM50A-201ENST00000374358 ZNF233A6NK53 670 aa17■□□□□ 0.31
TMEM50A-201ENST00000374358 TULP1O00294 542 aaPredicted RBP17■□□□□ 0.31
TMEM50A-201ENST00000374358 HSF2BPO75031 334 aa17■□□□□ 0.31
TMEM50A-201ENST00000374358 LRRN2O75325 713 aa17■□□□□ 0.31
TMEM50A-201ENST00000374358 C1orf186Q6ZWK4 172 aa17■□□□□ 0.31
TMEM50A-201ENST00000374358 FAM186BQ8IYM0 893 aa17■□□□□ 0.31
TMEM50A-201ENST00000374358 TAF4BQ92750 862 aa17■□□□□ 0.31
TMEM50A-201ENST00000374358 AKT1S1Q96B36 256 aa17■□□□□ 0.31
TMEM50A-201ENST00000374358 POLR3CQ9BUI4 534 aaPredicted RBP17■□□□□ 0.31
TMEM50A-201ENST00000374358 TISP43B9A030 160 aa17■□□□□ 0.31
TMEM50A-201ENST00000374358 EVI5O60447 810 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms