RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 JMJD4Q9H9V9 463 aa16.4■□□□□ 0.22
UBXN11-204ENST00000374217 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
UBXN11-204ENST00000374217 AFG3L2Q9Y4W6 797 aa16.4■□□□□ 0.22
UBXN11-204ENST00000374217 CAPN6Q9Y6Q1 641 aa16.4■□□□□ 0.22
UBXN11-204ENST00000374217 TRIM49BA6NDI0 452 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 ZNF233A6NK53 670 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 RASSF10A6NK89 507 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 MYO1FO00160 1098 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 FGFR1OPO95684 399 aaKnown RBP16.39■□□□□ 0.21
UBXN11-204ENST00000374217 SLC8A1P32418 973 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 HSPA9P38646 679 aaKnown RBP16.39■□□□□ 0.21
UBXN11-204ENST00000374217 KIF11P52732 1056 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 HMGCS2P54868 508 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 BIRC3Q13489 604 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 CEP85LQ5SZL2 805 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 SYDE2Q5VT97 1194 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 CCDC13Q8IYE1 715 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 CNOT6LQ96LI5 555 aaKnown RBP16.39■□□□□ 0.21
UBXN11-204ENST00000374217 FEM1BQ9UK73 627 aa16.39■□□□□ 0.21
UBXN11-204ENST00000374217 UNCXA6NJT0 531 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 ZNF263O14978 683 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 PRPHP41219 470 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
UBXN11-204ENST00000374217 SLC35G1Q2M3R5 365 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 LDLRAD1Q5T700 205 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 CCDC121Q6ZUS5 278 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 C4orf32Q8N8J7 132 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 CCDC43Q96MW1 224 aaKnown RBP16.38■□□□□ 0.21
UBXN11-204ENST00000374217 DUSP9Q99956 384 aaKnown RBP16.38■□□□□ 0.21
UBXN11-204ENST00000374217 NOC4LQ9BVI4 516 aaKnown RBP16.38■□□□□ 0.21
UBXN11-204ENST00000374217 PLCB1Q9NQ66 1216 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 EMILIN3Q9NT22 766 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 PNMA6FA0A0J9YX94 578 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 SPDYE5A6NIY4 337 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 RBAK-RBAKDNI3L0D1 243 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 ZBTB5O15062 677 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 ITGBL1O95965 494 aaPredicted RBP16.38■□□□□ 0.21
UBXN11-204ENST00000374217 VCAM1P19320 739 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 MTIF2P46199 727 aaKnown RBP16.38■□□□□ 0.21
UBXN11-204ENST00000374217 NLRP5P59047 1200 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 DGKZQ13574 1117 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 SNCBQ16143 134 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 BTNL9Q6UXG8 535 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 RUFY4Q6ZNE9 571 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 GPKOWQ92917 476 aaPredicted RBP eCLIP16.38■□□□□ 0.21
UBXN11-204ENST00000374217 AK8Q96MA6 479 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 PCMTD1Q96MG8 357 aaPredicted RBP16.38■□□□□ 0.21
UBXN11-204ENST00000374217 TFR2Q9UP52 801 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 DUSP10Q9Y6W6 482 aa16.38■□□□□ 0.21
UBXN11-204ENST00000374217 WNT7AO00755 349 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 COBLO75128 1261 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 PAEPP09466 180 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 HSPA6P17066 643 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 PMS1P54277 932 aaKnown RBP16.37■□□□□ 0.21
UBXN11-204ENST00000374217 CYP27A1Q02318 531 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 CUL1Q13616 776 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 CRYMQ14894 314 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 IL17AQ16552 155 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 LACTB2Q53H82 288 aaPredicted RBP16.37■□□□□ 0.21
UBXN11-204ENST00000374217 MIIPQ5JXC2 388 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 BANK1Q8NDB2 785 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 SYN2Q92777 582 aaPredicted RBP16.37■□□□□ 0.21
UBXN11-204ENST00000374217 LRRC45Q96CN5 670 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 RPAP3Q9H6T3 665 aaPredicted RBP16.37■□□□□ 0.21
UBXN11-204ENST00000374217 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
UBXN11-204ENST00000374217 C5orf60A6NFR6 353 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 hCG_1984214I3L0E3 225 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 IRF6O14896 467 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 AKR1B10O60218 316 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 MOCS3O95396 460 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 KRT14P02533 472 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 GHRP10912 638 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 EZRP15311 586 aaKnown RBP16.36■□□□□ 0.21
UBXN11-204ENST00000374217 NAPAP54920 295 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 TNNC1P63316 161 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 PPIL2Q13356 520 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 CDC37Q16543 378 aaPredicted RBP16.36■□□□□ 0.21
UBXN11-204ENST00000374217 NAALADL2Q58DX5 795 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 GALNT17Q6IS24 598 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 NFRKBQ6P4R8 1299 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 DTHD1Q6ZMT9 781 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 ZNF713Q8N859 430 aaPredicted RBP16.36■□□□□ 0.21
UBXN11-204ENST00000374217 SGSM3Q96HU1 749 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 TLR10Q9BXR5 811 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 TMBIM4Q9HC24 238 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 SLC40A1Q9NP59 571 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 RBM12Q9NTZ6 932 aaKnown RBP16.36■□□□□ 0.21
UBXN11-204ENST00000374217 BARHL2Q9NY43 387 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 ARHGAP20Q9P2F6 1191 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
UBXN11-204ENST00000374217 PAPPA2Q9BXP8 1791 aa16.36■□□□□ 0.21
UBXN11-204ENST00000374217 PLA2G6O60733 806 aa16.35■□□□□ 0.21
UBXN11-204ENST00000374217 FLOT1O75955 427 aa16.35■□□□□ 0.21
UBXN11-204ENST00000374217 HEXIM1O94992 359 aaKnown RBP16.35■□□□□ 0.21
UBXN11-204ENST00000374217 GCFC2P16383 781 aaKnown RBP16.35■□□□□ 0.21
UBXN11-204ENST00000374217 CALRP27797 417 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms