RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 CST5P28325 142 aaPredicted RBP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 BEX3Q00994 111 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 DPYDQ12882 1025 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 DHX8Q14562 1220 aaKnown RBP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 PLCB4Q15147 1175 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 LHX8Q68G74 356 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 GPBP1Q86WP2 473 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 CKAP2LQ8IYA6 745 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 KLHDC9Q8NEP7 349 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 NRBP2Q9NSY0 501 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 KCND2Q9NZV8 630 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 KIAA1468Q9P260 1216 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 SEPT9Q9UHD8 586 aaPredicted RBP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 MYH9P35579 1960 aaKnown RBP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 TMEM150BA6NC51 233 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 H3BRB1 525 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 KPNA6O60684 536 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 CCDC173Q0VFZ6 552 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 CUL4BQ13620 913 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 ARSHQ5FYA8 562 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 XKR9Q5GH70 373 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 PLA2G4FQ68DD2 849 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 RINT1Q6NUQ1 792 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 C1orf186Q6ZWK4 172 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 SPATA20Q8TB22 786 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 DDX12PQ92771 950 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 CCDC43Q96MW1 224 aaKnown RBP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 RUSC1Q9BVN2 902 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 TUT1Q9H6E5 874 aaKnown RBP16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 CYP26B1Q9NR63 512 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 PPME1Q9Y570 386 aa16.29■□□□□ 0.2
SMPDL3B-201ENST00000373888 ZEB2O60315 1214 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 MARK3P27448 753 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 CASP1P29466 404 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 NPEPPSP55786 919 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 PURAQ00577 322 aaKnown RBP16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 TARBP2Q15633 366 aaKnown RBP16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 GNASQ5JWF2 1037 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 PADI6Q6TGC4 694 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 TRMT1LQ7Z2T5 733 aaKnown RBP16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 KAT2BQ92831 832 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 ERCC4Q92889 916 aaPredicted RBP16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 CEP170P1Q96L14 293 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 UNC93B1Q9H1C4 597 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 RBSNQ9H1K0 784 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 BLZF1Q9H2G9 400 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 PAK6Q9NQU5 681 aaPredicted RBP16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 BMP2KQ9NSY1 1161 aaPredicted RBP16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 TUBE1Q9UJT0 475 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 PCDHA5Q9Y5H7 936 aa16.28■□□□□ 0.2
SMPDL3B-201ENST00000373888 ARID2Q68CP9 1835 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 HBP1O60381 514 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 SMC2O95347 1197 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 MYL3P08590 195 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 CCDC192P0DO97 292 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 SARSP49591 514 aaKnown RBP16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 CCSAPQ6IQ19 270 aaPredicted RBP16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 DNAJC19Q96DA6 116 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 CEP89Q96ST8 783 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 SH2D3AQ9BRG2 576 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 PRDM10Q9NQV6 1147 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
SMPDL3B-201ENST00000373888 CENPFP49454 3210 aa16.27■□□□□ 0.19
SMPDL3B-201ENST00000373888 ZBTB42B2RXF5 422 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 HAS3O00219 553 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 DGAT1O75907 488 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 GUCY2CP25092 1073 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 ASIC1P78348 528 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 MTFR1Q15390 333 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 MTERF2Q49AM1 385 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 RNF180Q86T96 592 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 PCSK9Q8NBP7 692 aaKnown RBP16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 SMARCE1Q969G3 411 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 ARMC5Q96C12 935 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 ZNF333Q96JL9 665 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 GSDMAQ96QA5 445 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 TIPINQ9BVW5 301 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 KATNAL1Q9BW62 490 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 FRMPD3Q5JV73 1810 aa16.26■□□□□ 0.19
SMPDL3B-201ENST00000373888 PVALEFA0A1B0GWK0 134 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 FRMD3A2A2Y4 597 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 KLRC4O43908 158 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 USO1O60763 962 aaKnown RBP16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 CCL5P13501 91 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 GIT2Q14161 759 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 MFSD10Q14728 455 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 LRRC41Q15345 812 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 ZNF484Q5JVG2 852 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 UNC13DQ70J99 1090 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 REEP2Q9BRK0 252 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 MTG1Q9BT17 334 aaPredicted RBP16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 PDLIM7Q9NR12 457 aa16.25■□□□□ 0.19
SMPDL3B-201ENST00000373888 COL1A2P08123 1366 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms