RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PARD6BQ9BYG5 372 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 H3BRJ5 948 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 KIAA1755Q5JYT7 1200 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 TEDDM1Q5T9Z0 273 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 TRIM59Q8IWR1 403 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 GIMAP8Q8ND71 665 aaPredicted RBP12.36□□□□□ -0.43
VCL-202ENST00000372755 DCAF4Q8WV16 495 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 TRIM55Q9BYV6 548 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 ASNSD1Q9NWL6 643 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 L3MBTL1Q9Y468 752 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 ESRRBO95718 433 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 GUCY2CP25092 1073 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 NR5A1Q13285 461 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 CTTNQ14247 550 aaKnown RBP12.36□□□□□ -0.43
VCL-202ENST00000372755 USP17L2Q6R6M4 530 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 ACAD11Q709F0 780 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 ZNF589Q86UQ0 364 aaPredicted RBP12.36□□□□□ -0.43
VCL-202ENST00000372755 GNAT1P11488 350 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 LIFRP42702 1097 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 CAV1Q03135 178 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 TBCCQ15814 346 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 CDO1Q16878 200 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 ARHGEF25Q86VW2 580 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 ATP6V0A4Q9HBG4 840 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 CAPN11Q9UMQ6 739 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 SYNGAP1Q96PV0 1343 aa12.36□□□□□ -0.43
VCL-202ENST00000372755 BNIP3LO60238 219 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 MCF2P10911 925 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 CATSPER4Q7RTX7 472 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 SAYSD1Q9NPB0 183 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 HACD3Q9P035 362 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 PZPP20742 1482 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 GOLGA8IPA6NC78 632 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 GOLGA8JA6NMD2 632 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 TMPRSS15P98073 1019 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 GRAMD1BQ3KR37 738 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 ELMOD1Q8N336 334 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 NLRP4Q96MN2 994 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 APOBEC2Q9Y235 224 aaKnown RBP12.35□□□□□ -0.43
VCL-202ENST00000372755 WDR62O43379 1518 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 ERVV-1B6SEH8 477 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 PRKAB2O43741 272 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 EEPD1Q7L9B9 569 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 FGGP02679 453 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 NSUN2Q08J23 767 aaKnown RBP eCLIP12.35□□□□□ -0.43
VCL-202ENST00000372755 LLGL1Q15334 1064 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 KLHL38Q2WGJ6 581 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 IFT43Q96FT9 208 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 MXD3Q9BW11 206 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 TOPORSQ9NS56 1045 aaPredicted RBP12.35□□□□□ -0.43
VCL-202ENST00000372755 KLHL8Q9P2G9 620 aaPredicted RBP12.35□□□□□ -0.43
VCL-202ENST00000372755 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 ATP5HO75947 161 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 CALB1P05937 261 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 TMEM35BQ8NCS4 154 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 PPP1R16BQ96T49 567 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 NGRNQ9NPE2 291 aaKnown RBP12.35□□□□□ -0.43
VCL-202ENST00000372755 SUFUQ9UMX1 484 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 ITM2BQ9Y287 266 aa12.35□□□□□ -0.43
VCL-202ENST00000372755 KDM5AP29375 1690 aaKnown RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 CTIFO43310 598 aaKnown RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 EIF2AK2P19525 551 aaKnown RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 LRRC31Q6UY01 552 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 FSD1LQ9BXM9 530 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 PITPNM3Q9BZ71 974 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 EDEM3Q9BZQ6 932 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 SEC31BQ9NQW1 1179 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 HPCAL4Q9UM19 191 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 USP17L3A6NCW0 530 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 USP17L4A6NCW7 530 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 TADA3O75528 432 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 USP17L1Q7RTZ2 530 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 LRRC37BQ96QE4 947 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 ADAM22Q9P0K1 906 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 CEP72Q9P209 647 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 ZBTB1Q9Y2K1 713 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 PCDHB6Q9Y5E3 794 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 ACSL3O95573 720 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 MYL3P08590 195 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 TOGARAM2Q6ZUX3 1019 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 TMEM179Q6ZVK1 233 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 CYP26B1Q9NR63 512 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 TRIM33Q9UPN9 1127 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 E2F6O75461 281 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 ANP32DO95626 131 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 SYF2O95926 243 aaKnown RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 CDK8P49336 464 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 PEX3P56589 373 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 PTK2BQ14289 1009 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 CASP8Q14790 479 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 NUGGCQ68CJ6 796 aa12.34□□□□□ -0.43
VCL-202ENST00000372755 HIBCHQ6NVY1 386 aaPredicted RBP12.34□□□□□ -0.43
VCL-202ENST00000372755 MCPH1Q8NEM0 835 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms