RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 NKX3-2P78367 333 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 BEX3Q00994 111 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 NR1I3Q14994 352 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 TMEM106CQ9BVX2 250 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 KIAA0100Q14667 2235 aaKnown RBP17.81■□□□□ 0.44
C9orf78-201ENST00000372447 A6NJR5 290 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 CCNE2O96020 404 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
C9orf78-201ENST00000372447 PRCPP42785 496 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 GJA8P48165 433 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 AMPD3Q01432 767 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 TPD52L1Q16890 204 aaPredicted RBP17.81■□□□□ 0.44
C9orf78-201ENST00000372447 KLHDC9Q8NEP7 349 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 PPTC7Q8NI37 304 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 NELFBQ8WX92 580 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 ABHD8Q96I13 439 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 C7orf25Q9BPX7 421 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 TEKT3Q9BXF9 490 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 TRIM9Q9C026 710 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 CRISPLD2Q9H0B8 497 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 SPC25Q9HBM1 224 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 OGDHLQ9ULD0 1010 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 PCDHA12Q9UN75 941 aa17.81■□□□□ 0.44
C9orf78-201ENST00000372447 TPM2P07951 284 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 GRB10Q13322 594 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 LRRC41Q15345 812 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 FSCN1Q16658 493 aaKnown RBP17.8■□□□□ 0.44
C9orf78-201ENST00000372447 GNASQ5JWF2 1037 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 B3GNT9Q6UX72 402 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 APTXQ7Z2E3 356 aaKnown RBP17.8■□□□□ 0.44
C9orf78-201ENST00000372447 ADSSL1Q8N142 457 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 CTAGE1Q96RT6 745 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 GPR20Q99678 358 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 UNC45AQ9H3U1 944 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 KCND1Q9NSA2 647 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 VAV3Q9UKW4 847 aa17.8■□□□□ 0.44
C9orf78-201ENST00000372447 DOCK5Q9H7D0 1870 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 POTEMA6NI47 508 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 NOP56O00567 594 aaKnown RBP17.79■□□□□ 0.44
C9orf78-201ENST00000372447 TFRCP02786 760 aaKnown RBP17.79■□□□□ 0.44
C9orf78-201ENST00000372447 SPIRE1Q08AE8 756 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 PTPN21Q16825 1174 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 KRT79Q5XKE5 535 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 SPECC1LQ69YQ0 1117 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 CCSAPQ6IQ19 270 aaPredicted RBP17.79■□□□□ 0.44
C9orf78-201ENST00000372447 RNF180Q86T96 592 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 CCDC47Q96A33 483 aaKnown RBP17.79■□□□□ 0.44
C9orf78-201ENST00000372447 CDK5RAP3Q96JB5 506 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 PRIMPOLQ96LW4 560 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 STK17AQ9UEE5 414 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 GSTTP1A0A1W2PQM5 241 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 MMP3P08254 477 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 CST5P28325 142 aaPredicted RBP17.79■□□□□ 0.44
C9orf78-201ENST00000372447 CPT1AP50416 773 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 ACTR2P61160 394 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 KRT76Q01546 638 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 TBX2Q13207 712 aaPredicted RBP17.79■□□□□ 0.44
C9orf78-201ENST00000372447 ZNF746Q6NUN9 644 aaPredicted RBP17.79■□□□□ 0.44
C9orf78-201ENST00000372447 TNS4Q8IZW8 715 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 ARRDC4Q8NCT1 418 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 CCDC112Q8NEF3 446 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 SEPT1Q8WYJ6 367 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 PNMA5Q96PV4 448 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 MAPK8IP1Q9UQF2 711 aa17.79■□□□□ 0.44
C9orf78-201ENST00000372447 CHMP2AO43633 222 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 PPFIA4O75335 1185 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 ATG7O95352 703 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 KCNJ6P48051 423 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 PPP2R5CQ13362 524 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 STIM1Q13586 685 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 KCNA10Q16322 511 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 SV2BQ7L1I2 683 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 SNX29Q8TEQ0 813 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 C16orf45Q96MC5 204 aaPredicted RBP17.78■□□□□ 0.44
C9orf78-201ENST00000372447 GTPBP4Q9BZE4 634 aaKnown RBP17.78■□□□□ 0.44
C9orf78-201ENST00000372447 BLOC1S4Q9NUP1 217 aa17.78■□□□□ 0.44
C9orf78-201ENST00000372447 USP27XA6NNY8 438 aa17.77■□□□□ 0.44
C9orf78-201ENST00000372447 EML1O00423 815 aa17.77■□□□□ 0.44
C9orf78-201ENST00000372447 HOXD8P13378 290 aaPredicted RBP17.77■□□□□ 0.44
C9orf78-201ENST00000372447 TCF7P36402 384 aaPredicted RBP17.77■□□□□ 0.44
C9orf78-201ENST00000372447 ASIC1P78348 528 aa17.77■□□□□ 0.44
C9orf78-201ENST00000372447 DGKDQ16760 1214 aa17.77■□□□□ 0.44
C9orf78-201ENST00000372447 FILIP1LQ4L180 1135 aa17.77■□□□□ 0.44
C9orf78-201ENST00000372447 BRDTQ58F21 947 aaPredicted RBP17.77■□□□□ 0.44
C9orf78-201ENST00000372447 ABHD15Q6UXT9 468 aa17.77■□□□□ 0.44
C9orf78-201ENST00000372447 CCAR2Q8N163 923 aaKnown RBP17.77■□□□□ 0.44
C9orf78-201ENST00000372447 LARP4BQ92615 738 aaKnown RBP17.77■□□□□ 0.44
C9orf78-201ENST00000372447 TMX1Q9H3N1 280 aa17.77■□□□□ 0.44
C9orf78-201ENST00000372447 EXOC1Q9NV70 894 aa17.77■□□□□ 0.44
C9orf78-201ENST00000372447 ASGR1P07306 291 aa17.76■□□□□ 0.43
C9orf78-201ENST00000372447 MNX1P50219 401 aaPredicted RBP17.76■□□□□ 0.43
C9orf78-201ENST00000372447 SPAG1Q07617 926 aa17.76■□□□□ 0.43
C9orf78-201ENST00000372447 TMEM119Q4V9L6 283 aa17.76■□□□□ 0.43
C9orf78-201ENST00000372447 SMAP1Q8IYB5 467 aaPredicted RBP17.76■□□□□ 0.43
C9orf78-201ENST00000372447 LIMA1Q9UHB6 759 aaKnown RBP17.76■□□□□ 0.43
C9orf78-201ENST00000372447 TCEAL9Q9UHQ7 104 aa17.76■□□□□ 0.43
C9orf78-201ENST00000372447 PCDHA10Q9Y5I2 948 aa17.76■□□□□ 0.43
C9orf78-201ENST00000372447 LRRC10BA6NIK2 292 aa17.76■□□□□ 0.43
C9orf78-201ENST00000372447 WDR64B1ANS9 1081 aa17.76■□□□□ 0.43
C9orf78-201ENST00000372447 PSMA7O14818 248 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms