RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 RMI1Q9H9A7 625 aa14.36□□□□□ -0.11
RAPGEF1-201ENST00000372189 DCCP43146 1447 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 EVI5O60447 810 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 RBL2Q08999 1139 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 KCTD16Q68DU8 428 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 P2RX5Q93086 422 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 FAM81BQ96LP2 452 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 PASKQ96RG2 1323 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 AFPP02771 609 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 CLCN6P51797 869 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 LMNB2Q03252 620 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 ZBED2Q9BTP6 218 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 SRPRBQ9Y5M8 271 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 NTSR2O95665 410 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 BAG2O95816 211 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 ARPP19P56211 112 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 SCARF1Q14162 830 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 SURF1Q15526 300 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 RABL6Q3YEC7 729 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 ZNF658Q5TYW1 1059 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 ENAHQ8N8S7 591 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 RPF1Q9H9Y2 349 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 PCDHB6Q9Y5E3 794 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 CLIC2O15247 247 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 ATF2P15336 505 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 PLCG1P19174 1290 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 OSTNP61366 133 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 ATG9AQ7Z3C6 839 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 CTAGE3PQ8IX95 158 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 TBC1D22BQ9NU19 505 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 INTS9Q9NV88 658 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 CSPG5O95196 566 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 PCDHA5Q9Y5H7 936 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 WDR19Q8NEZ3 1342 aa14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 USP42Q9H9J4 1324 aaKnown RBP14.35□□□□□ -0.11
RAPGEF1-201ENST00000372189 SYNJ2BP-COX16A0A087WUM0 186 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 ITKQ08881 620 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 DPCR1Q3MIW9 517 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 ARL6IP4Q66PJ3 421 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 LRRC8CQ8TDW0 803 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 TSC22D3Q99576 134 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 PARD6BQ9BYG5 372 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 MRPL46Q9H2W6 279 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 COX16Q9P0S2 106 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 DAGLAQ9Y4D2 1042 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 BZW2Q9Y6E2 419 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 SLFN14P0C7P3 912 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 EEF1GP26641 437 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 PRELPP51888 382 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 PHEXP78562 749 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 ELMSAN1Q6PJG2 1045 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 C7orf31Q8N865 590 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 TYW5A2RUC4 315 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 PSMD14O00487 310 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 CATSPER4Q7RTX7 472 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 NSUN4Q96CB9 384 aaKnown RBP14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 ATP6V0A4Q9HBG4 840 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 PNPLA7Q6ZV29 1317 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 E9PMD0 336 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 HNRNPCP07910 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 STAT3P40763 770 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 LINC00301Q8NCQ3 95 aa14.34□□□□□ -0.11
RAPGEF1-201ENST00000372189 GOLGA8QA0A0J9YX86 632 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 GOLGA8OA6NCC3 632 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 GOLGA8NF8WBI6 632 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 HMGCS2P54868 508 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 IL9RQ01113 521 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 ADGRF4Q8IZF3 695 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 TMCO5AQ8N6Q1 288 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 CFAP61Q8NHU2 1237 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 AIFM3Q96NN9 605 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 TUBGCP2Q9BSJ2 902 aa14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 ACTR5Q9H9F9 607 aaPredicted RBP14.33□□□□□ -0.11
RAPGEF1-201ENST00000372189 K7ERI5 159 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 HOXA7P31268 230 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 ZNF157P51786 506 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 RASSF7Q02833 373 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 RSRC2Q7L4I2 434 aaKnown RBP14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 EMILIN3Q9NT22 766 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 ZNF70Q9UC06 446 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 FER1L4A9Z1Z3 1794 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 WDR64B1ANS9 1081 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 ENC1O14682 589 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 INPP1P49441 399 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 EHHADHQ08426 723 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 SLFN12LQ6IEE8 588 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 OSBPL5Q9H0X9 879 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 A6NJR5 290 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 CDC25AP30304 524 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 ECE1P42892 770 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 MTMR2Q13614 643 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 NKX1-1Q15270 411 aaPredicted RBP14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 MSTO1Q9BUK6 570 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 SPZ1Q9BXG8 430 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 COBLO75128 1261 aa14.33□□□□□ -0.12
RAPGEF1-201ENST00000372189 RCAN1P53805 252 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms