RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
TSPAN1-201ENST00000372003 BICDL2A1A5D9 508 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 USO1O60763 962 aaKnown RBP12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 RHOBTB3O94955 611 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 TCP1P17987 556 aaKnown RBP12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 CALML3P27482 149 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 CASP1P29466 404 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 HNRNPH3P31942 346 aaKnown RBP12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 PRCPP42785 496 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 KIF5AQ12840 1032 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 ZNF174Q15697 407 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 COBLL1Q53SF7 1204 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 C1orf131Q8NDD1 294 aaKnown RBP12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 CHST13Q8NET6 341 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 CAVIN3Q969G5 261 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 MMP19Q99542 508 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 CAPS2Q9BXY5 557 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 ACAD9Q9H845 621 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 SH3GLB2Q9NR46 395 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 EXOC1Q9NV70 894 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 RNF14Q9UBS8 474 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 PNMA2Q9UL42 364 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 TRIM17Q9Y577 477 aa12.61□□□□□ -0.39
TSPAN1-201ENST00000372003 SRRM3A6NNA2 597 aaPredicted RBP12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 NFIBO00712 420 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 EIF3HO15372 352 aaKnown RBP eCLIP12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 ZEB2O60315 1214 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 TACC1O75410 805 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 FCER1AP12319 257 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 CDC25AP30304 524 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 COPB2P35606 906 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 EPHB4P54760 987 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 KCTD2Q14681 263 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 EMC10Q5UCC4 262 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 MCTP2Q6DN12 878 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 B4GALNT4Q76KP1 1039 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 RPAINQ86UA6 219 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 CCDC47Q96A33 483 aaKnown RBP12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 ERGIC2Q96RQ1 377 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 MTRQ99707 1265 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 CCSER1Q9C0I3 900 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 FBXO40Q9UH90 709 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 SNX12Q9UMY4 172 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 GABRQQ9UN88 632 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 MRPL11Q9Y3B7 192 aaKnown RBP12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 RLFQ13129 1914 aa12.6□□□□□ -0.39
TSPAN1-201ENST00000372003 ABCB11O95342 1321 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 FAM205CA6NFA0 338 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 LAD1O00515 517 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 ERLIN2O94905 339 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 LCA5LO95447 670 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 TFRCP02786 760 aaKnown RBP12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 PGK2P07205 417 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 HOXD10P28358 340 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 PRKCZQ05513 592 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 PFKFB3Q16875 520 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 GIMAP8Q8ND71 665 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 TBC1D5Q92609 795 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 SECISBP2LQ93073 1101 aaKnown RBP12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 BLZF1Q9H2G9 400 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 TRIM10Q9UDY6 481 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 ENC1O14682 589 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 STRNO43815 780 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 CFBP00751 764 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 SCG2P13521 617 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 IDEP14735 1019 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 CYP2B6P20813 491 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 ADORA2AP29274 412 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 STAT6P42226 847 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 NAPAP54920 295 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 TRAF1Q13077 416 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 BAATQ14032 418 aaPredicted RBP12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 SPA17Q15506 151 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 TTI2Q6NXR4 508 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 OTOP1Q7RTM1 612 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 DPP9Q86TI2 863 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 NCAPGQ9BPX3 1015 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 NUDT12Q9BQG2 462 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 A1CFQ9NQ94 594 aaKnown RBP12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 DISC1Q9NRI5 854 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 HDAC6Q9UBN7 1215 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 GGA2Q9UJY4 613 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 GJD2Q9UKL4 321 aa12.59□□□□□ -0.39
TSPAN1-201ENST00000372003 SLC15A5A6NIM6 579 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 CCNE1P24864 410 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 PRPHP41219 470 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 FLT3LGP49771 235 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 MORN1Q5T089 497 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 GALNT17Q6IS24 598 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 RNF207Q6ZRF8 634 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 CCDC91Q7Z6B0 441 aa12.58□□□□□ -0.4
TSPAN1-201ENST00000372003 YTHDF3Q7Z739 585 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms