RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DALRD3Q5D0E6 543 aaKnown RBP23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 PDIK1LQ8N165 341 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 SYNMO15061 1565 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 EFCAB6Q5THR3 1501 aa23.78■■□□□ 1.4
TM9SF3-201ENST00000371142 ARHGEF37A1IGU5 675 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 SLC27A3Q5K4L6 730 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 STRBPQ96SI9 672 aaKnown RBP23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 SAYSD1Q9NPB0 183 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 SCINQ9Y6U3 715 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 HDLBPQ00341 1268 aaKnown RBP23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 NFX1Q12986 1120 aaKnown RBP23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 ALS2CLQ60I27 953 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 TMEM179Q6ZVK1 233 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 CATSPER4Q7RTX7 472 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 HLFQ16534 295 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 HSP90AA5PQ58FG0 334 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 HABP4Q5JVS0 413 aaKnown RBP23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 TBC1D10CQ8IV04 446 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 FOXP4Q8IVH2 680 aaPredicted RBP23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 PIP4K2CQ8TBX8 421 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 FBXO41Q8TF61 875 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 RXRBP28702 533 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 ARID5BQ14865 1188 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 PLEKHG1Q9ULL1 1385 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 EEF1B2P24534 225 aaKnown RBP23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 MTMR1Q13613 665 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 ZBTB41Q5SVQ8 909 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 KLC3Q6P597 504 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 HEMGNQ9BXL5 484 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 ANAPC7Q9UJX3 599 aa23.77■■□□□ 1.4
TM9SF3-201ENST00000371142 ELF1P32519 619 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 ZNF667Q5HYK9 610 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 LCA5Q86VQ0 697 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 ESRRAP11474 423 aaPredicted RBP23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 OCRLQ01968 901 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 TRMT10CQ7L0Y3 403 aaKnown RBP23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 POLD4Q9HCU8 107 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 THEGQ9P2T0 379 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 PLAAQ9Y263 795 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 ERBB3P21860 1342 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 SRGAP2O75044 1071 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 SFR1Q86XK3 245 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 TJP3O95049 919 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 RHOT2Q8IXI1 618 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 DCAF4Q8WV16 495 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 UNC13DQ70J99 1090 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 SLC10A4Q96EP9 437 aa23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 RAVER2Q9HCJ3 691 aaKnown RBP23.76■■□□□ 1.39
TM9SF3-201ENST00000371142 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 CCDC151A5D8V7 595 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 C21orf2O43822 256 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 C6orf118Q5T5N4 469 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 FBXL13Q8NEE6 735 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 RMDN2Q96LZ7 410 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 GCNAQ96QF7 691 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 ABCB11O95342 1321 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 BRIP1Q9BX63 1249 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 ATP6V0A4Q9HBG4 840 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 SUCLA2Q9P2R7 463 aaPredicted RBP23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 FAM8A1Q9UBU6 413 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 ABT1Q9ULW3 272 aaKnown RBP23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 NSUN2Q08J23 767 aaKnown RBP eCLIP23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 ATG16L1Q676U5 607 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 ANGPTL8Q6UXH0 198 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 CYB5R4Q7L1T6 521 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 PPP1R12AO14974 1030 aaPredicted RBP23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 MAP3K7O43318 606 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 NMT2O60551 498 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 CRKP46108 304 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 JAK3P52333 1124 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 GANCQ8TET4 914 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 TTC17Q96AE7 1141 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 DRC3Q9H069 523 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 ADAM22Q9P0K1 906 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 KIF19Q2TAC6 998 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 HACD3Q9P035 362 aa23.75■■□□□ 1.39
TM9SF3-201ENST00000371142 ADCY2Q08462 1091 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 PDCD2Q16342 344 aaPredicted RBP23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 CNOT8Q9UFF9 292 aaKnown RBP23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 UNC13AQ9UPW8 1703 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 PI4K2BG5E9Z4 385 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 HSPA4LO95757 839 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 LDHAP00338 332 aaKnown RBP23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 EIF3BP55884 814 aaKnown RBP23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 CUL1Q13616 776 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 KRT33BQ14525 404 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 TRAIPQ9BWF2 469 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 PRELPP51888 382 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 AP3B2Q13367 1082 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 RC3H1Q5TC82 1133 aaKnown RBP23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 TUBB6Q9BUF5 446 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 SLC8A2Q9UPR5 921 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 SNX24Q9Y343 169 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 PALLDQ8WX93 1383 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 CHEK2O96017 543 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 GCLMP48507 274 aa23.74■■□□□ 1.39
TM9SF3-201ENST00000371142 GOLGA8MH3BSY2 632 aa23.73■■□□□ 1.39
TM9SF3-201ENST00000371142 TAF11Q15544 211 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms