RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 P4HBP07237 508 aaKnown RBP12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 IRX4P78413 519 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 DPP9Q86TI2 863 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 TRIM42Q8IWZ5 723 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 STK38LQ9Y2H1 464 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 MAD1L1Q9Y6D9 718 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 GOLGA8SH3BPF8 625 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 AKR1B1P15121 316 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 SFNP31947 248 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 SNX1Q13596 522 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 FAM47CQ5HY64 1035 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 ADSSL1Q8N142 457 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 FBXO40Q9UH90 709 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 AKT3Q9Y243 479 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 ITIH6Q6UXX5 1313 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 A0A087WUV0 522 aaPredicted RBP12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 CTDNEP1O95476 244 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 GARSP41250 739 aaKnown RBP12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 SNAP25P60880 206 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 C6orf118Q5T5N4 469 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 CYP4F22Q6NT55 531 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 CRAMP1Q96RY5 1269 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 AP1M1Q9BXS5 423 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 MTMR4Q9NYA4 1195 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 NXF1Q9UBU9 619 aaKnown RBP12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 ADAM21Q9UKJ8 722 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 TAF6LQ9Y6J9 622 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 ECE2O60344 883 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 QARSP47897 775 aaKnown RBP12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 CCZ1BP86790 482 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 CCZ1P86791 482 aaPredicted RBP12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 ADCY2Q08462 1091 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 TTC19Q6DKK2 380 aaPredicted RBP12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 PRPF38AQ8NAV1 312 aaKnown RBP12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 DPF2Q92785 391 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 MRFAP1Q9Y605 127 aa12.78□□□□□ -0.36
DEPDC1-201ENST00000370966 PDS5AQ29RF7 1337 aaKnown RBP12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 GOLGA8IPA6NC78 632 aa12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 GOLGA8JA6NMD2 632 aa12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 C21orf2O43822 256 aa12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 RHOBTB3O94955 611 aa12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 GPC5P78333 572 aa12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 DPYDQ12882 1025 aa12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 DALRD3Q5D0E6 543 aaKnown RBP12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 NME8Q8N427 588 aa12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 MSTO1Q9BUK6 570 aa12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 EPB41L4AQ9HCS5 686 aaPredicted RBP12.77□□□□□ -0.36
DEPDC1-201ENST00000370966 LRRD1A4D1F6 860 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 SLC26A4O43511 780 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 E4F1Q66K89 784 aaPredicted RBP12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 FAM149B1Q96BN6 582 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 KAZALD1Q96I82 304 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 FAM167AQ96KS9 214 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 NOVA2Q9UNW9 492 aaKnown RBP12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 GRID2IPA4D2P6 1211 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 FBXO33Q7Z6M2 555 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 TCP11Q8WWU5 503 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 RPS6KC1Q96S38 1066 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 OSBPL9Q96SU4 736 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 NUB1Q9Y5A7 615 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 SALL3Q9BXA9 1300 aa12.77□□□□□ -0.37
DEPDC1-201ENST00000370966 NTSR2O95665 410 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 ZNF543Q08ER8 600 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 FRMD5Q7Z6J6 570 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 RNF169Q8NCN4 708 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 NSUN6Q8TEA1 469 aaKnown RBP12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 DYDC2Q96IM9 177 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 C7orf25Q9BPX7 421 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 KCNF1Q9H3M0 494 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 LCMT1Q9UIC8 334 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 IPO5O00410 1097 aaKnown RBP12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 PDXKO00764 312 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 ATP6V0A4Q9HBG4 840 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 HOXC10Q9NYD6 342 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 CLTAP09496 248 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 MSH2P43246 934 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 PDE1BQ01064 536 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 GFPT1Q06210 699 aaPredicted RBP12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 MYO1EQ12965 1108 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 GIMAP8Q8ND71 665 aaPredicted RBP12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 ZRANB2O95218 330 aaKnown RBP eCLIP12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 EYA4O95677 639 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 NR1I3Q14994 352 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 EPHA7Q15375 998 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 PDIK1LQ8N165 341 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 TMEM35BQ8NCS4 154 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 NCAPGQ9BPX3 1015 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 CALN1Q9BXU9 219 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 ADAM22Q9P0K1 906 aa12.76□□□□□ -0.37
DEPDC1-201ENST00000370966 CNOT8Q9UFF9 292 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms