RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 TACO1Q9BSH4 297 aaKnown RBP21.18■□□□□ 0.98
LMO4-202ENST00000370544 CEP152O94986 1710 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 RWDD2BP57060 319 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 MUM1Q2TAK8 710 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 SGMS1Q86VZ5 419 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 ASPHQ12797 758 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 RBBP5Q15291 538 aaKnown RBP21.17■□□□□ 0.98
LMO4-202ENST00000370544 QRICH1Q2TAL8 776 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 PLA2G12BQ9BX93 195 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 ABHD10Q9NUJ1 306 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 NFIXQ14938 502 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 KIAA1841Q6NSI8 718 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 CATSPER4Q7RTX7 472 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 ARHGEF40Q8TER5 1519 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 MYL3P08590 195 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 ZNF667Q5HYK9 610 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 TOGARAM2Q6ZUX3 1019 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 XXYLT1Q8NBI6 393 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 NEK9Q8TD19 979 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 RNF146Q9NTX7 359 aa21.17■□□□□ 0.98
LMO4-202ENST00000370544 F5H6K3 240 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 KLRC3Q07444 240 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 CCDC197Q8NCU1 140 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 CCT5P48643 541 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 KIAA1586Q9HCI6 787 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 HIP1RO75146 1068 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 ANXA13P27216 316 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 ARID5BQ14865 1188 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 DSTYKQ6XUX3 929 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 CPSF3Q9UKF6 684 aaKnown RBP21.16■□□□□ 0.98
LMO4-202ENST00000370544 ABT1Q9ULW3 272 aaKnown RBP21.16■□□□□ 0.98
LMO4-202ENST00000370544 CCDC151A5D8V7 595 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 CLDN3O15551 220 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 TRIM42Q8IWZ5 723 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 WHAMMQ8TF30 809 aa21.16■□□□□ 0.98
LMO4-202ENST00000370544 MAGED2Q9UNF1 606 aaPredicted RBP21.15■□□□□ 0.98
LMO4-202ENST00000370544 RAB44Q7Z6P3 723 aaPredicted RBP21.15■□□□□ 0.98
LMO4-202ENST00000370544 OR6B3Q8NGW1 331 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 CFAP61Q8NHU2 1237 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 FAN1Q9Y2M0 1017 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 SLC16A4O15374 487 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 GPC4O75487 556 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 KRT3P12035 628 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 PSMA2P25787 234 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 SLC7A5Q01650 507 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 SATB1Q01826 763 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 ZWILCHQ9H900 591 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 TSGA10IPQ3SY00 556 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 RYBPQ8N488 228 aaPredicted RBP21.15■□□□□ 0.98
LMO4-202ENST00000370544 NEDD1Q8NHV4 660 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 PRPF31Q8WWY3 499 aaKnown RBP21.15■□□□□ 0.98
LMO4-202ENST00000370544 LRRC53A6NM62 1247 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 XPAP23025 273 aaPredicted RBP21.15■□□□□ 0.98
LMO4-202ENST00000370544 SFNP31947 248 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 MMEL1Q495T6 779 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 JADE1Q6IE81 842 aa21.15■□□□□ 0.98
LMO4-202ENST00000370544 E9PCH4 1651 aa21.14■□□□□ 0.98
LMO4-202ENST00000370544 KIF28PB7ZC32 967 aa21.14■□□□□ 0.98
LMO4-202ENST00000370544 BAG2O95816 211 aa21.14■□□□□ 0.98
LMO4-202ENST00000370544 MAPK6Q16659 721 aa21.14■□□□□ 0.98
LMO4-202ENST00000370544 APOBEC3FQ8IUX4 373 aaKnown RBP21.14■□□□□ 0.98
LMO4-202ENST00000370544 SART1O43290 800 aaKnown RBP21.14■□□□□ 0.97
LMO4-202ENST00000370544 SLCO1A2P46721 670 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 GCLMP48507 274 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 TNFAIP2Q03169 654 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 MCUQ8NE86 351 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 ZNF302Q9NR11 478 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 ESYT2A0FGR8 921 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 POTEFA5A3E0 1075 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 FGGP02679 453 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 POTEIP0CG38 1075 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 LIG3P49916 1009 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 KNOP1Q1ED39 458 aaKnown RBP21.14■□□□□ 0.97
LMO4-202ENST00000370544 POTEGQ6S5H5 508 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 POTEEQ6S8J3 1075 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 GJD4Q96KN9 370 aaPredicted RBP21.14■□□□□ 0.97
LMO4-202ENST00000370544 FMO2Q99518 471 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 MTRQ99707 1265 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 P4HBP07237 508 aaKnown RBP21.14■□□□□ 0.97
LMO4-202ENST00000370544 SEPT6Q14141 434 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 RNF139Q8WU17 664 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 HSPH1Q92598 858 aa21.14■□□□□ 0.97
LMO4-202ENST00000370544 DIS3Q9Y2L1 958 aaKnown RBP21.14■□□□□ 0.97
LMO4-202ENST00000370544 PALMO75781 387 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 THOC5Q13769 683 aaKnown RBP21.13■□□□□ 0.97
LMO4-202ENST00000370544 CDO1Q16878 200 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 MIPOL1Q8TD10 442 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 KIF9Q9HAQ2 790 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 MT-ND3P03897 115 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 AKR1B1P15121 316 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 STAT3P40763 770 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 CFAP36Q96G28 342 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 ZNF18P17022 549 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 PHKA2P46019 1235 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 KCNH2Q12809 1159 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 NNTQ13423 1086 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 NKX1-1Q15270 411 aaPredicted RBP21.13■□□□□ 0.97
LMO4-202ENST00000370544 ZKSCAN8Q15776 578 aaPredicted RBP21.13■□□□□ 0.97
LMO4-202ENST00000370544 ARL13BQ3SXY8 428 aa21.13■□□□□ 0.97
LMO4-202ENST00000370544 DCLK2Q8N568 766 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms