RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 ZNF572Q7Z3I7 529 aaPredicted RBP11.88□□□□□ -0.51
LRIF1-201ENST00000369763 TPCN2Q8NHX9 752 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 PCIF1Q9H4Z3 704 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 ACP6Q9NPH0 428 aa11.88□□□□□ -0.51
LRIF1-201ENST00000369763 DDX3XO00571 662 aaKnown RBP eCLIP11.87□□□□□ -0.511e-29■■■□□ 19.2
LRIF1-201ENST00000369763 FLOT1O75955 427 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 QPCTQ16769 361 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 COBLL1Q53SF7 1204 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 MYCBPAPQ8TBZ2 947 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 IPO4Q8TEX9 1081 aaKnown RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 NUCKS1Q9H1E3 243 aaKnown RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 EPN3Q9H201 632 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 AIPL1Q9NZN9 384 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 ZBTB21Q9ULJ3 1066 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 PPP1R9AQ9ULJ8 1098 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 IGSF9BQ9UPX0 1349 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 KDM3AQ9Y4C1 1321 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 DDTLA6NHG4 134 aaPredicted RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 TISP43B9A030 160 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 EVI5O60447 810 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 BUB1BO60566 1050 aaPredicted RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 GNA14O95837 355 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 EPB41P11171 864 aaKnown RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 USP11P51784 963 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 UBAP2Q5T6F2 1119 aaKnown RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 CNOT8Q9UFF9 292 aaKnown RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 HLA-DOAP06340 250 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 SPATA31C1P0DKV0 1188 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 PLTPP55058 493 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 GABPAQ06546 454 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 ZNF844Q08AG5 666 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 SEMA3FQ13275 785 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 SPRED3Q2MJR0 410 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 KCNV1Q6PIU1 500 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 RBM17Q96I25 401 aaKnown RBP11.87□□□□□ -0.51
LRIF1-201ENST00000369763 PTPN22Q9Y2R2 807 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 SNX24Q9Y343 169 aa11.87□□□□□ -0.51
LRIF1-201ENST00000369763 MEIS2O14770 477 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 ATMINO43313 823 aaPredicted RBP11.86□□□□□ -0.51
LRIF1-201ENST00000369763 IL1R1P14778 569 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 ECHS1P30084 290 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 CLK2P49760 499 aaKnown RBP11.86□□□□□ -0.51
LRIF1-201ENST00000369763 ITGB3BPQ13352 177 aaPredicted RBP11.86□□□□□ -0.51
LRIF1-201ENST00000369763 CCDC174Q6PII3 467 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 JPH2Q9BR39 696 aaPredicted RBP11.86□□□□□ -0.51
LRIF1-201ENST00000369763 DNAJC18Q9H819 358 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 MEFVO15553 781 aaPredicted RBP11.86□□□□□ -0.51
LRIF1-201ENST00000369763 FAM13AO94988 1023 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
LRIF1-201ENST00000369763 KDM7AQ6ZMT4 941 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 MMS22LQ6ZRQ5 1243 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 PHLDB2Q86SQ0 1253 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 VPS36Q86VN1 386 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 CCDC25Q86WR0 208 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 SLC35G2Q8TBE7 412 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 WHAMMQ8TF30 809 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 SLC35C1Q96A29 364 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 ARHGEF26Q96DR7 871 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.86□□□□□ -0.51
LRIF1-201ENST00000369763 GGT7Q9UJ14 662 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 ABCB11O95342 1321 aa11.86□□□□□ -0.51
LRIF1-201ENST00000369763 GOLGA6L7A0A1B0GV03 622 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 SNHG28P0DPA3 235 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 SKOR1P84550 965 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 ACTN3Q08043 901 aaPredicted RBP11.85□□□□□ -0.51
LRIF1-201ENST00000369763 DRAP1Q14919 205 aaPredicted RBP11.85□□□□□ -0.51
LRIF1-201ENST00000369763 GPATCH4Q5T3I0 446 aaKnown RBP11.85□□□□□ -0.51
LRIF1-201ENST00000369763 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.512e-7■□□□□ 9.6
LRIF1-201ENST00000369763 HOOK2Q96ED9 719 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 EDEM3Q9BZQ6 932 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 ISCUQ9H1K1 167 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 DNAJC17Q9NVM6 304 aaKnown RBP11.85□□□□□ -0.51
LRIF1-201ENST00000369763 RABGAP1Q9Y3P9 1069 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 MSH4O15457 936 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 IFNAR2P48551 515 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 ICA1Q05084 483 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 CBWD6Q4V339 395 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 CCDC38Q502W7 563 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 CBWD3Q5JTY5 395 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 CBWD5Q5RIA9 395 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 AEBP2Q6ZN18 517 aaPredicted RBP11.85□□□□□ -0.51
LRIF1-201ENST00000369763 BARGINQ6ZT62 677 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 CPNE8Q86YQ8 564 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 FAM186BQ8IYM0 893 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 LRRC57Q8N9N7 239 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
LRIF1-201ENST00000369763 THAP2Q9H0W7 228 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 KCNMB3Q9NPA1 279 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 RNF14Q9UBS8 474 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 DNAJC12Q9UKB3 198 aa11.85□□□□□ -0.51
LRIF1-201ENST00000369763 SCAF8Q9UPN6 1271 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms