RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 RDM1Q8NG50 284 aa15.61■□□□□ 0.09
HMGCS2-201ENST00000369406 GTF3C2Q8WUA4 911 aaPredicted RBP15.61■□□□□ 0.09
HMGCS2-201ENST00000369406 MRPL44Q9H9J2 332 aaKnown RBP15.61■□□□□ 0.09
HMGCS2-201ENST00000369406 DNAH12Q6ZR08 3092 aa15.61■□□□□ 0.09
HMGCS2-201ENST00000369406 BICDL2A1A5D9 508 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 FAM13AO94988 1023 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 GGPS1O95749 300 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 ARMCX2Q7L311 632 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 TCEAL9Q9UHQ7 104 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 PSAPP07602 524 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 CCZ1BP86790 482 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 CCZ1P86791 482 aaPredicted RBP15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 FAM110CQ1W6H9 321 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 XKR9Q5GH70 373 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 MIIPQ5JXC2 388 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 CCDC62Q6P9F0 684 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 LRRC8AQ8IWT6 810 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 PARVGQ9HBI0 331 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 OLFML3Q9NRN5 406 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 COL4A3BPQ9Y5P4 624 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 TLL2Q9Y6L7 1015 aa15.6■□□□□ 0.09
HMGCS2-201ENST00000369406 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 RNF225M0QZC1 329 aaPredicted RBP15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 GCNT3O95395 438 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 CCNA1P78396 465 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 MAMDC4Q6UXC1 1216 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 KATNBL1Q9H079 304 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 GPBP1L1Q9HC44 474 aaPredicted RBP15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 BRCA2P51587 3418 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 IGKV6D-21A0A0A0MT36 114 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 GOLGA6L6A8MZA4 724 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 GRB14Q14449 540 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 BMT2Q1RMZ1 405 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 HSDL1Q3SXM5 330 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 TRIM50Q86XT4 487 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 BSNDQ8WZ55 320 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 GTPBP4Q9BZE4 634 aaKnown RBP15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 XPNPEP1Q9NQW7 623 aa15.59■□□□□ 0.09
HMGCS2-201ENST00000369406 B4DLN1 442 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 N4BP3O15049 544 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 TGFB1I1O43294 461 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 GAP43P17677 238 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 EEF1GP26641 437 aaKnown RBP15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 PPP1R2P41236 205 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 LRRC63Q05C16 580 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 TAPT1Q6NXT6 567 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 NPLOC4Q8TAT6 608 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 ZNF507Q8TCN5 953 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 STRA6Q9BX79 667 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 ANKEF1Q9NU02 776 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 KCND2Q9NZV8 630 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 ODF2LQ9ULJ1 636 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 MAFBQ9Y5Q3 323 aaPredicted RBP15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 EVPLQ92817 2033 aa15.58■□□□□ 0.09
HMGCS2-201ENST00000369406 PPP1R37O75864 691 aa15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 SNAI1O95863 264 aaPredicted RBP15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 KLK7P49862 253 aa15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 ODR4Q5SWX8 454 aa15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 MIS18BP1Q6P0N0 1132 aa15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 ZNF720Q7Z2F6 126 aa15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 IFNL1Q8IU54 200 aa15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 ZC3H3Q8IXZ2 948 aaKnown RBP15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 TUBGCP2Q9BSJ2 902 aa15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 IMPACTQ9P2X3 320 aa15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 SEPT9Q9UHD8 586 aaPredicted RBP15.58■□□□□ 0.08
HMGCS2-201ENST00000369406 SIP14410 1827 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 TISP43B9A030 160 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 TAF1CQ15572 869 aaPredicted RBP15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 KNOP1Q1ED39 458 aaKnown RBP15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 SPECC1LQ69YQ0 1117 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 METTL7BQ6UX53 244 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 ATP6V0A1Q93050 837 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 CEP89Q96ST8 783 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 KIFC3Q9BVG8 833 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 ZNF302Q9NR11 478 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 PDLIM7Q9NR12 457 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 MANSC4A6NHS7 340 aaPredicted RBP15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 LGALS16A8MUM7 142 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 CTGFP29279 349 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 TCF7P36402 384 aaPredicted RBP15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 SPAG1Q07617 926 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 CELF3Q5SZQ8 465 aaKnown RBP15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 NOC3LQ8WTT2 800 aaKnown RBP15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 CEP170P1Q96L14 293 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 GPR20Q99678 358 aa15.57■□□□□ 0.08
HMGCS2-201ENST00000369406 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 RASSF10A6NK89 507 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 ADCY6O43306 1168 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 ADKP55263 362 aaKnown RBP15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 GRM1Q13255 1194 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 PLEKHH3Q7Z736 793 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 FAM178BQ8IXR5 827 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 ABRAQ8N0Z2 381 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 CCDC155Q8N6L0 562 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 TC2NQ8N9U0 490 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 CTAGE1Q96RT6 745 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 CYP26B1Q9NR63 512 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 CLIC2O15247 247 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 TGFB3P10600 412 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 NEDD9Q14511 834 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms