RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SLC16A4O15374 487 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 MAP3K7O43318 606 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 TAF11Q15544 211 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 KRT80Q6KB66 452 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 MAP4K1Q92918 833 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 RNF26Q9BY78 433 aaPredicted RBP19.49■□□□□ 0.71
SNX27-202ENST00000368841 PNMA2Q9UL42 364 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 NEDD4P46934 1319 aa19.49■□□□□ 0.71
SNX27-202ENST00000368841 SNX2O60749 519 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 SLC8A1P32418 973 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 POU5F1BQ06416 359 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 COG4Q9H9E3 785 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 CFAP69A5D8W1 941 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 FGGP02679 453 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 ERFP50548 548 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 ZNF211Q13398 564 aaPredicted RBP19.48■□□□□ 0.71
SNX27-202ENST00000368841 GRAMD1BQ3KR37 738 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 ARL13BQ3SXY8 428 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 KLC3Q6P597 504 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 WDR48Q8TAF3 677 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 PI4KBQ9UBF8 816 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 ATG16L1Q676U5 607 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 TWF2Q6IBS0 349 aaKnown RBP19.48■□□□□ 0.71
SNX27-202ENST00000368841 H0Y3Z8 333 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 KCNV2Q8TDN2 545 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 ANAPC7Q9UJX3 599 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 PCDHA6Q9UN73 950 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 PCDHA8Q9Y5H6 950 aa19.48■□□□□ 0.71
SNX27-202ENST00000368841 RBM46Q8TBY0 533 aaKnown RBP19.48■□□□□ 0.71
SNX27-202ENST00000368841 ATP7AQ04656 1500 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 LBRQ14739 615 aaKnown RBP19.47■□□□□ 0.71
SNX27-202ENST00000368841 IMPG1Q17R60 797 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 PLAAQ9Y263 795 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 GCLMP48507 274 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 MTMR1Q13613 665 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 GSDMAQ96QA5 445 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 RRP15Q9Y3B9 282 aaKnown RBP19.47■□□□□ 0.71
SNX27-202ENST00000368841 NCK2O43639 380 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 ZNF746Q6NUN9 644 aaPredicted RBP19.47■□□□□ 0.71
SNX27-202ENST00000368841 MRFAP1L1Q96HT8 127 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 CCDC17Q96LX7 622 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 TDRD3Q9H7E2 651 aaKnown RBP19.47■□□□□ 0.71
SNX27-202ENST00000368841 SPAG7O75391 227 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 KRT10P13645 584 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 VPS11Q9H270 941 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 RASGRF2O14827 1237 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 MYBP10242 640 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 ESRRAP11474 423 aaPredicted RBP19.47■□□□□ 0.71
SNX27-202ENST00000368841 ATP1A3P13637 1013 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 RFWD2Q8NHY2 731 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 ELAC2Q9BQ52 826 aaKnown RBP19.47■□□□□ 0.71
SNX27-202ENST00000368841 PARD6BQ9BYG5 372 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 TRPV6Q9H1D0 765 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 PACSIN2Q9UNF0 486 aaPredicted RBP19.47■□□□□ 0.71
SNX27-202ENST00000368841 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
SNX27-202ENST00000368841 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 SYNE4Q8N205 404 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 PNMA6FA0A0J9YX94 578 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 CIAO1O76071 339 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 RASGRF1Q13972 1273 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 MDH1BQ5I0G3 518 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 FAM47EQ6ZV65 393 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 DYDC2Q96IM9 177 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 KLHL11Q9NVR0 708 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 TRPC5Q9UL62 973 aaPredicted RBP19.46■□□□□ 0.71
SNX27-202ENST00000368841 ZHX2Q9Y6X8 837 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 DFFAO00273 331 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 CIAPIN1Q6FI81 312 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 EFCAB13Q8IY85 973 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 MED4Q9NPJ6 270 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L15C9J2P7 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L13C9JLJ4 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L11C9JVI0 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L18D6R9N7 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L22D6RA61 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L17D6RBQ6 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L19D6RCP7 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L20D6RJB6 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 PRPF4O43172 522 aaKnown RBP eCLIP19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L24Q0WX57 530 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 HLFQ16534 295 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 USP17L6PQ6QN14 398 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 TMEM270Q6UE05 265 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 RGS9BPQ6ZS82 235 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 NLRP10Q86W26 655 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 ADAM33Q9BZ11 813 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 ARMCX2Q7L311 632 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 THEM5Q8N1Q8 247 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 MB21D1Q8N884 522 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 FMO2Q99518 471 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 LCP1P13796 627 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 CDC25BP30305 580 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 ZNF568Q3ZCX4 644 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 AK8Q96MA6 479 aa19.46■□□□□ 0.71
SNX27-202ENST00000368841 JPH2Q9BR39 696 aaPredicted RBP19.46■□□□□ 0.71
SNX27-202ENST00000368841 SETSIPP0DME0 302 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 ELMOD1Q8N336 334 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 SLC17A8Q8NDX2 589 aa19.45■□□□□ 0.7
SNX27-202ENST00000368841 RNF25Q96BH1 459 aaPredicted RBP19.45■□□□□ 0.7
SNX27-202ENST00000368841 POLR3CQ9BUI4 534 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms