RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TELO2Q9Y4R8 837 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 INSL6Q9Y581 213 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 H3BRB1 525 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 TREHO43280 583 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 LETM1O95202 739 aaPredicted RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 THPOP40225 353 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 SEMA3FQ13275 785 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 PTPAQ15257 358 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 NPY5RQ15761 445 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 LEXMQ3ZCV2 418 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 TMEM31Q5JXX7 168 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 FAM178BQ8IXR5 827 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 MRPS27Q92552 414 aaKnown RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 TOP1MTQ969P6 601 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 PIGSQ96S52 555 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 SPZ1Q9BXG8 430 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 TNMDQ9H2S6 317 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 CLSTN2Q9H4D0 955 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 TUT1Q9H6E5 874 aaKnown RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 DDX19AQ9NUU7 478 aaKnown RBP11.25□□□□□ -0.61
TPM3-210ENST00000368530 PCDHB6Q9Y5E3 794 aa11.25□□□□□ -0.61
TPM3-210ENST00000368530 FRMPD4Q14CM0 1322 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 EMSYQ7Z589 1322 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 A0A1B0GVL5 298 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 SPATA31C2B4DYI2 1134 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 STXBP3O00186 592 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 SMIM10L2AP0DMW4 78 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 SMIM10L2BP0DMW5 78 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 ICAM3P32942 547 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 COL19A1Q14993 1142 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 RILPL1Q5EBL4 403 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 ADALQ6DHV7 355 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 PIK3AP1Q6ZUJ8 805 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 CKAP2LQ8IYA6 745 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 RNF214Q8ND24 703 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 ATP6V0A1Q93050 837 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 CLIC6Q96NY7 704 aa11.24□□□□□ -0.61
TPM3-210ENST00000368530 INPP4AQ96PE3 977 aaPredicted RBP11.24□□□□□ -0.61
TPM3-210ENST00000368530 SEC63Q9UGP8 760 aaKnown RBP11.24□□□□□ -0.61
TPM3-210ENST00000368530 C17orf102A2RUQ5 167 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
TPM3-210ENST00000368530 LGALS2P05162 132 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 LINC00271P0C7V0 271 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 POLR2MP0CAP2 368 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 CCND2P30279 289 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 NDUFA8P51970 172 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 NAPAP54920 295 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 FAM160A1Q05DH4 1040 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 EPC2Q52LR7 807 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
TPM3-210ENST00000368530 FCHSD1Q86WN1 690 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 MYOCDQ8IZQ8 938 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 BLIDQ8IZY5 108 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 FBXO22Q8NEZ5 403 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 NEK9Q8TD19 979 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 MRPL38Q96DV4 380 aaKnown RBP11.23□□□□□ -0.61
TPM3-210ENST00000368530 MLXIPQ9HAP2 919 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 SH3GLB2Q9NR46 395 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 SETD4Q9NVD3 440 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 BARHL2Q9NY43 387 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 NOL7Q9UMY1 257 aaKnown RBP11.23□□□□□ -0.61
TPM3-210ENST00000368530 PCDHA4Q9UN74 947 aa11.23□□□□□ -0.61
TPM3-210ENST00000368530 MYH7BA7E2Y1 1941 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 SIP14410 1827 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 PNMA6FA0A0J9YX94 578 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 A0A1W2PQ27 194 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 A0A1W2PQ64 194 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 A0A1W2PQD8 194 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 FAM86C2PA6NEL3 165 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 H3BNC9 293 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 WNT7AO00755 349 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 KINO60870 393 aaKnown RBP11.22□□□□□ -0.61
TPM3-210ENST00000368530 PPP6R2O75170 966 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 AMHP03971 560 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 IL9P15248 144 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 KCNA5P22460 613 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 SNW1Q13573 536 aaKnown RBP11.22□□□□□ -0.61
TPM3-210ENST00000368530 ZNF174Q15697 407 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 FAM26DQ5JW98 314 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 GJD3Q8N144 294 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 CCDC148Q8NFR7 591 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 GPR20Q99678 358 aa11.22□□□□□ -0.61
TPM3-210ENST00000368530 CAND2O75155 1236 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 PFKFB1P16118 471 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 TTC38Q5R3I4 469 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 SHC4Q6S5L8 630 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 METTL7BQ6UX53 244 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 TRIM50Q86XT4 487 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 FMR1NBQ8N0W7 255 aaPredicted RBP11.21□□□□□ -0.61
TPM3-210ENST00000368530 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
TPM3-210ENST00000368530 ENGASEQ8NFI3 743 aa11.21□□□□□ -0.61
TPM3-210ENST00000368530 SEPT8Q92599 483 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms