RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 TMEM199Q8N511 208 aa20.91■□□□□ 0.94
LMNA-204ENST00000368298 RETREG2Q8NC44 543 aa20.91■□□□□ 0.94
LMNA-204ENST00000368298 ZNF396Q96N95 335 aaPredicted RBP20.91■□□□□ 0.94
LMNA-204ENST00000368298 FTOQ9C0B1 505 aaKnown RBP eCLIP20.91■□□□□ 0.94
LMNA-204ENST00000368298 DDX11L8A8MPP1 907 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 MED24O75448 989 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 PARNO95453 639 aaKnown RBP20.9■□□□□ 0.94
LMNA-204ENST00000368298 IQCF3P0C7M6 154 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 SELPP16109 830 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 YWHABP31946 246 aaKnown RBP20.9■□□□□ 0.94
LMNA-204ENST00000368298 SLC39A14Q15043 492 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 TRAF7Q6Q0C0 670 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 RUFY4Q6ZNE9 571 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 OTUD6AQ7L8S5 288 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 TRMT1LQ7Z2T5 733 aaKnown RBP20.9■□□□□ 0.94
LMNA-204ENST00000368298 PRO3102Q9H379 93 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 TANC1Q9C0D5 1861 aa20.9■□□□□ 0.94
LMNA-204ENST00000368298 VWA3AA6NCI4 1184 aa20.89■□□□□ 0.94
LMNA-204ENST00000368298 FAM26DQ5JW98 314 aa20.89■□□□□ 0.94
LMNA-204ENST00000368298 NME8Q8N427 588 aa20.89■□□□□ 0.94
LMNA-204ENST00000368298 AK8Q96MA6 479 aa20.89■□□□□ 0.94
LMNA-204ENST00000368298 CYP26B1Q9NR63 512 aa20.89■□□□□ 0.94
LMNA-204ENST00000368298 ANKEF1Q9NU02 776 aa20.89■□□□□ 0.94
LMNA-204ENST00000368298 SEPT9Q9UHD8 586 aaPredicted RBP20.89■□□□□ 0.94
LMNA-204ENST00000368298 IGKV6-21A0A0C4DH24 114 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 RFC2P35250 354 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 MDM2Q00987 491 aaPredicted RBP20.88■□□□□ 0.93
LMNA-204ENST00000368298 FPGSQ05932 587 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 ZNF618Q5T7W0 954 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 FOXD4L5Q5VV16 416 aaPredicted RBP20.88■□□□□ 0.93
LMNA-204ENST00000368298 LRRC8DQ7L1W4 858 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 RSPH3Q86UC2 560 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 KCTD17Q8N5Z5 321 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 LINC01465Q8N7H1 131 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 FOXD4L4Q8WXT5 416 aaPredicted RBP20.88■□□□□ 0.93
LMNA-204ENST00000368298 GBP4Q96PP9 640 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 MMTAG2Q9BU76 263 aaKnown RBP20.88■□□□□ 0.93
LMNA-204ENST00000368298 TMEM150BA6NC51 233 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 CSF2RAP15509 400 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 LONP1P36776 959 aaKnown RBP20.88■□□□□ 0.93
LMNA-204ENST00000368298 THPOP40225 353 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 CCL23P55773 120 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 PPIGQ13427 754 aaKnown RBP eCLIP20.88■□□□□ 0.932e-8■■■□□ 17.3
LMNA-204ENST00000368298 KRT79Q5XKE5 535 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 EXOC8Q8IYI6 725 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 KIAA0319LQ8IZA0 1049 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 LINC00301Q8NCQ3 95 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 DNAJB3Q8WWF6 145 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 VWCEQ96DN2 955 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 ZBTB10Q96DT7 871 aa20.88■□□□□ 0.93
LMNA-204ENST00000368298 FBXO2Q9UK22 296 aaPredicted RBP20.88■□□□□ 0.93
LMNA-204ENST00000368298 SRPRBQ9Y5M8 271 aaKnown RBP20.88■□□□□ 0.93
LMNA-204ENST00000368298 EVPLQ92817 2033 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 ZBTB39O15060 712 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 SLC26A4O43511 780 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 MAFO75444 373 aaPredicted RBP20.87■□□□□ 0.93
LMNA-204ENST00000368298 YEATS4O95619 227 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 CCT6AP40227 531 aaKnown RBP20.87■□□□□ 0.93
LMNA-204ENST00000368298 TBC1D8BQ0IIM8 1120 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 GPNMBQ14956 572 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 MTERF2Q49AM1 385 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 HYIQ5T013 277 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 NACC1Q96RE7 527 aa20.87■□□□□ 0.93
LMNA-204ENST00000368298 DBR1Q9UK59 544 aaKnown RBP20.87■□□□□ 0.93
LMNA-204ENST00000368298 COLQQ9Y215 455 aaPredicted RBP20.87■□□□□ 0.93
LMNA-204ENST00000368298 ARID2Q68CP9 1835 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 PP2D1A8MPX8 630 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 RSPH10B2B2RC85 870 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 PFKMP08237 780 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 RSPH10BP0C881 870 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 CDC25AP30304 524 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 RFC5P40937 340 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 NPEPPSP55786 919 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 CEBPZQ03701 1054 aaKnown RBP20.86■□□□□ 0.93
LMNA-204ENST00000368298 ECM1Q16610 540 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 PLA2G4FQ68DD2 849 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 EFCAB12Q6NXP0 572 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 ZNF710Q8N1W2 664 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 ZNF579Q8NAF0 562 aaKnown RBP20.86■□□□□ 0.93
LMNA-204ENST00000368298 SNX29Q8TEQ0 813 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 SCLYQ96I15 445 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 CEP170P1Q96L14 293 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 JPH2Q9BR39 696 aaPredicted RBP20.86■□□□□ 0.93
LMNA-204ENST00000368298 DHX33Q9H6R0 707 aaKnown RBP20.86■□□□□ 0.93
LMNA-204ENST00000368298 IL23AQ9NPF7 189 aa20.86■□□□□ 0.93
LMNA-204ENST00000368298 TFIP11Q9UBB9 837 aaKnown RBP20.86■□□□□ 0.93
LMNA-204ENST00000368298 PPP6R2O75170 966 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 CHRNA1P02708 482 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 RARRES1P49788 294 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 GRIN1Q05586 938 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 MGAT3Q09327 533 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 MBTPS1Q14703 1052 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 IER5Q5VY09 327 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 C16orf59Q7L2K0 433 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 RPUSD2Q8IZ73 545 aaKnown RBP20.85■□□□□ 0.93
LMNA-204ENST00000368298 SH2D3AQ9BRG2 576 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 CFAP45Q9UL16 551 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 ATP6V1DQ9Y5K8 247 aa20.85■□□□□ 0.93
LMNA-204ENST00000368298 KDM3AQ9Y4C1 1321 aa20.84■□□□□ 0.93
LMNA-204ENST00000368298 CXCL10P02778 98 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms