RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 KANK3Q6NY19 840 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 STAG2Q8N3U4 1231 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 C12orf76Q8N812 135 aaPredicted RBP16.94■□□□□ 0.3
VAMP4-202ENST00000367740 FEZF2Q8TBJ5 459 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
VAMP4-202ENST00000367740 ESR2Q92731 530 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 SENP7Q9BQF6 1050 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 CYP26B1Q9NR63 512 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 ERAP1Q9NZ08 941 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 PUF60Q9UHX1 559 aaKnown RBP16.94■□□□□ 0.3
VAMP4-202ENST00000367740 DBR1Q9UK59 544 aaKnown RBP16.94■□□□□ 0.3
VAMP4-202ENST00000367740 FBXL21Q9UKT6 434 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 ATRXP46100 2492 aa16.94■□□□□ 0.3
VAMP4-202ENST00000367740 C2orf71A6NGG8 1288 aa16.93■□□□□ 0.3
VAMP4-202ENST00000367740 M0QZ92 97 aa16.93■□□□□ 0.3
VAMP4-202ENST00000367740 CLASP2O75122 1294 aaKnown RBP16.93■□□□□ 0.3
VAMP4-202ENST00000367740 FGFR1P11362 822 aa16.93■□□□□ 0.3
VAMP4-202ENST00000367740 PBX3P40426 434 aa16.93■□□□□ 0.3
VAMP4-202ENST00000367740 ZC3H14Q6PJT7 736 aaKnown RBP16.93■□□□□ 0.3
VAMP4-202ENST00000367740 TMC7Q7Z402 723 aa16.93■□□□□ 0.3
VAMP4-202ENST00000367740 CELF4Q9BZC1 486 aaKnown RBP16.93■□□□□ 0.3
VAMP4-202ENST00000367740 DCTPP1Q9H773 170 aa16.93■□□□□ 0.3
VAMP4-202ENST00000367740 HELLSQ9NRZ9 838 aa16.93■□□□□ 0.3
VAMP4-202ENST00000367740 KDM3AQ9Y4C1 1321 aa16.93■□□□□ 0.3
VAMP4-202ENST00000367740 A0A0D9SFI3 127 aa16.92■□□□□ 0.3
VAMP4-202ENST00000367740 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
VAMP4-202ENST00000367740 ENAHQ8N8S7 591 aaPredicted RBP16.92■□□□□ 0.3
VAMP4-202ENST00000367740 MRPL43Q8N983 215 aaKnown RBP16.92■□□□□ 0.3
VAMP4-202ENST00000367740 SUMF1Q8NBK3 374 aa16.92■□□□□ 0.3
VAMP4-202ENST00000367740 RGS18Q9NS28 235 aa16.92■□□□□ 0.3
VAMP4-202ENST00000367740 BAZ2BQ9UIF8 2168 aaKnown RBP16.91■□□□□ 0.3
VAMP4-202ENST00000367740 GSTTP1A0A1W2PQM5 241 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 KRBA1A5PL33 1030 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 C9IYK1 514 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 INSRRP14616 1297 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 ATXN1P54253 815 aaKnown RBP16.91■□□□□ 0.3
VAMP4-202ENST00000367740 NFX1Q12986 1120 aaKnown RBP16.91■□□□□ 0.3
VAMP4-202ENST00000367740 ATAT1Q5SQI0 421 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 KCNT2Q6UVM3 1135 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 LRRC55Q6ZSA7 311 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 ZNF589Q86UQ0 364 aaPredicted RBP16.91■□□□□ 0.3
VAMP4-202ENST00000367740 IQCA1Q86XH1 822 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 ADAM2Q99965 735 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 CHMP4BQ9H444 224 aaKnown RBP16.91■□□□□ 0.3
VAMP4-202ENST00000367740 RNF41Q9H4P4 317 aaPredicted RBP16.91■□□□□ 0.3
VAMP4-202ENST00000367740 C1orf112Q9NSG2 853 aa16.91■□□□□ 0.3
VAMP4-202ENST00000367740 DENND3A2RUS2 1198 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 RRN3P2A6NIE6 340 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 NARSO43776 548 aaKnown RBP16.9■□□□□ 0.3
VAMP4-202ENST00000367740 SP9P0CG40 484 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 PPM1AP35813 382 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 SLC35G1Q2M3R5 365 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 CCDC178Q5BJE1 867 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 XRRA1Q6P2D8 792 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 GLG1Q92896 1179 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 ZSCAN10Q96SZ4 725 aaPredicted RBP16.9■□□□□ 0.3
VAMP4-202ENST00000367740 KCNK12Q9HB15 430 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 DZANK1Q9NVP4 752 aa16.9■□□□□ 0.3
VAMP4-202ENST00000367740 CACNA1IQ9P0X4 2223 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 PATJQ8NI35 1801 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 ATP9AO75110 1047 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 KCNA2P16389 499 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 KRT76Q01546 638 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 KRT17Q04695 432 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 KIAA0319Q5VV43 1072 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 HOMER1Q86YM7 354 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 GIMAP8Q8ND71 665 aaPredicted RBP16.89■□□□□ 0.29
VAMP4-202ENST00000367740 TRAPPC12Q8WVT3 735 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 SEPT1Q8WYJ6 367 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 ACSF2Q96CM8 615 aaPredicted RBP16.89■□□□□ 0.29
VAMP4-202ENST00000367740 ZNF558Q96NG5 402 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 SMARCAD1Q9H4L7 1026 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 TMEM161AQ9NX61 479 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 RALYQ9UKM9 306 aaKnown RBP16.89■□□□□ 0.29
VAMP4-202ENST00000367740 NOC2LQ9Y3T9 749 aaKnown RBP16.89■□□□□ 0.29
VAMP4-202ENST00000367740 PCDHA2Q9Y5H9 948 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 ASPMQ8IZT6 3477 aa16.89■□□□□ 0.29
VAMP4-202ENST00000367740 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 STK25O00506 426 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 CFHP08603 1231 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 EPCAMP16422 314 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 TBC1D8BQ0IIM8 1120 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 MCMDC2Q4G0Z9 681 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 PCNX4Q63HM2 1172 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 TMEM40Q8WWA1 233 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 CASD1Q96PB1 797 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 PCYT2Q99447 389 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 TMEM117Q9H0C3 514 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 ATP6V0A4Q9HBG4 840 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 RNF19AQ9NV58 838 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 SPG21Q9NZD8 308 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 DLGAP2Q9P1A6 1054 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 MAD2L2Q9UI95 211 aa16.88■□□□□ 0.29
VAMP4-202ENST00000367740 FAM208BQ5VWN6 2430 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 SMIM35A0A1B0GVV1 85 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 RPS6KA5O75582 802 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 ADRB1P08588 477 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms