RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 ABCB6Q9NP58 842 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 PCDHA13Q9Y5I0 950 aa9.57□□□□□ -0.88
SYNE1-209ENST00000367257 PLEKHG2Q9H7P9 1386 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 GOLGA8JA6NMD2 632 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 BTBD18B2RXH4 712 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 SMAPO00193 183 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 PRDM1O75626 825 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 ARHGDIAP52565 204 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 HDAC4P56524 1084 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 PPARDQ03181 441 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 IFRD2Q12894 506 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 ARL13BQ3SXY8 428 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 ELMSAN1Q6PJG2 1045 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 LARGE2Q8N3Y3 721 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 C17orf50Q8WW18 174 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 SLC7A3Q8WY07 619 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 POMGNT1Q8WZA1 660 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 VIPAS39Q9H9C1 493 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 NHEJ1Q9H9Q4 299 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 CYP26B1Q9NR63 512 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 LRRIQ3A6PVS8 624 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 ERVV-1B6SEH8 477 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 SH2B2O14492 632 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 GNGT2O14610 69 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 KRT1P04264 644 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 ARL4CP56559 192 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 MRPS35P82673 323 aaKnown RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 PTH1RQ03431 593 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 TAP1Q03518 808 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 KYAT1Q16773 422 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 ZNF483Q8TF39 744 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 SEL1LQ9UBV2 794 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 NRBP1Q9UHY1 535 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 PCDHB4Q9Y5E5 795 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 EXOC1LA0A1B0GW35 172 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 GSTA4O15217 222 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 SERPINB2P05120 415 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 IL6STP40189 918 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 AP3M2P53677 418 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 ART3Q13508 389 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 SCYL2Q6P3W7 929 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 TRIM72Q6ZMU5 477 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 NANOGNBQ7Z5D8 188 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 MFN1Q8IWA4 741 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 PAPOLBQ9NRJ5 636 aaKnown RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 MAD1L1Q9Y6D9 718 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 DLC1Q96QB1 1528 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 KIAA0391O15091 583 aaKnown RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 KRT16P08779 473 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 PHKG2P15735 406 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 MX2P20592 715 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 MFSD14BQ5SR56 506 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 DGKHQ86XP1 1220 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 TMCO5AQ8N6Q1 288 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 GIMAP8Q8ND71 665 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-209ENST00000367257 ITFG2Q969R8 447 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 MYL10Q9BUA6 226 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 TRAIPQ9BWF2 469 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 KLC2Q9H0B6 622 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 MON2Q7Z3U7 1717 aa9.56□□□□□ -0.88
SYNE1-209ENST00000367257 TMEM2Q9UHN6 1383 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 IQCA1LA6NCM1 817 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 JAK3P52333 1124 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 RESTQ13127 1097 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 NAA30Q147X3 362 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-209ENST00000367257 SYT2Q8N9I0 419 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-209ENST00000367257 MIEF2Q96C03 454 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 SLC39A2Q9NP94 309 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 ARHGAP26Q9UNA1 814 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 CLIC4Q9Y696 253 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 CALB1P05937 261 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 MCF2P10911 925 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 GJA8P48165 433 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 MB21D1Q8N884 522 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 USP33Q8TEY7 942 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 DYDC2Q96IM9 177 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 PARVGQ9HBI0 331 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 PARVBQ9HBI1 364 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 A0A1W2PQC6 194 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 TMEM247A6NEH6 219 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 CCND2P30279 289 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 CHRNA3P32297 505 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 ADD2P35612 726 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 CDR2Q01850 454 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 CYLC2Q14093 348 aaPredicted RBP9.55□□□□□ -0.88
SYNE1-209ENST00000367257 MESDQ14696 234 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 USH1GQ495M9 461 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 TCP11X2Q5H9J9 407 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 UNC13DQ70J99 1090 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 MAGEB5Q9BZ81 275 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 NDST4Q9H3R1 872 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 E9PMD0 336 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 EEF1DP29692 281 aaKnown RBP9.55□□□□□ -0.88
SYNE1-209ENST00000367257 CIITAP33076 1130 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 MXI1P50539 228 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 TNFAIP2Q03169 654 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 RESP18Q5W5W9 173 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 RAPH1Q70E73 1250 aa9.55□□□□□ -0.88
SYNE1-209ENST00000367257 FBXL13Q8NEE6 735 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms