RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 BRDTQ58F21 947 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 CHD4Q14839 1912 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 SBK1Q52WX2 424 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 ATG16L1Q676U5 607 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 IL25Q9H293 177 aa12.7□□□□□ -0.38
CDC42BPA-202ENST00000366764 PDXKO00764 312 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 ZNF189O75820 626 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 IQANK1A0A1B0GTG1 560 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 PTPAQ15257 358 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 NT5DC1Q5TFE4 455 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 FUT8Q9BYC5 575 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 AP1M1Q9BXS5 423 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 MLXIPQ9HAP2 919 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 GYS2P54840 703 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 FAM208AQ9UK61 1670 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 ANTXR2P58335 489 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 BEND6Q5SZJ8 279 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 DNAJC24Q6P3W2 148 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 TRAPPC11Q7Z392 1133 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 FAM160B2Q86V87 743 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 MID2Q9UJV3 735 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 PCDHB4Q9Y5E5 795 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 CALB1P05937 261 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 SLFN12LQ6IEE8 588 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 REXO1L1PQ8IX06 675 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 KLC4Q9NSK0 619 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 CASZ1Q86V15 1759 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 AGTP01019 485 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 JAK3P52333 1124 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 TTC13Q8NBP0 860 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 CSF1RP07333 972 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 ARL1P40616 181 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 POLGP54098 1239 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 GRAPQ13588 217 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 SLC7A3Q8WY07 619 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 CENPKQ9BS16 269 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 BATF3Q9NR55 127 aa12.69□□□□□ -0.38
CDC42BPA-202ENST00000366764 DBN1Q16643 649 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 CC2D2BQ6DHV5 1058 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 RSRC2Q7L4I2 434 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 TEX2Q8IWB9 1127 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 SGK1O00141 431 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 FAM107AO95990 144 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 TMEM191BP0C7N4 346 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 YWHAGP61981 247 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 ERFEQ4G0M1 354 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 XXYLT1Q8NBI6 393 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 DDX17Q92841 729 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 CCT8L2Q96SF2 557 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 PFDN4Q9NQP4 134 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 MAP3K7O43318 606 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 ZWINTO95229 277 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 MDH1P40925 334 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 PITPNM3Q9BZ71 974 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 DRC3Q9H069 523 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 SMIM24O75264 130 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 KRT37O76014 449 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 DPF2Q92785 391 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 TRIM6Q9C030 488 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 PLAGL2Q9UPG8 496 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 CA4P22748 312 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 NUGGCQ68CJ6 796 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 FXR1P51114 621 aaKnown RBP eCLIP12.68□□□□□ -0.385e-6■■■□□ 17.2
CDC42BPA-202ENST00000366764 FAM160B1Q5W0V3 765 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 TRMT10CQ7L0Y3 403 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 ESYT2A0FGR8 921 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 SESN3P58005 492 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 TMED2Q15363 201 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 TAF11Q15544 211 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 CYP4F22Q6NT55 531 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 NEDD1Q8NHV4 660 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 MOV10L1Q9BXT6 1211 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 BHMT2Q9H2M3 363 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 HESX1Q9UBX0 185 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 PPP1R9AQ9ULJ8 1098 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 MT-ND3P03897 115 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 LSP1P33241 339 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 PTPROQ16827 1216 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 GEN1Q17RS7 908 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 RAD9BQ6WBX8 426 aa12.68□□□□□ -0.38
CDC42BPA-202ENST00000366764 ACSL3O95573 720 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 E2F4Q16254 413 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 OPHN1O60890 802 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 ACTN1P12814 892 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms