RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 CELF4Q9BZC1 486 aaKnown RBP14.11□□□□□ -0.15
MRPL55-209ENST00000366735 C22orf23Q9BZE7 217 aa14.11□□□□□ -0.15
MRPL55-209ENST00000366735 AAASQ9NRG9 546 aa14.11□□□□□ -0.15
MRPL55-209ENST00000366735 CD207Q9UJ71 328 aa14.11□□□□□ -0.15
MRPL55-209ENST00000366735 PADI3Q9ULW8 664 aa14.11□□□□□ -0.15
MRPL55-209ENST00000366735 BACH1O14867 736 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 ZBTB43O43298 467 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 MBTPS2O43462 519 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 HBP1O60381 514 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 REC8O95072 547 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 LINC00271P0C7V0 271 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 HYAL1Q12794 435 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 PLCB4Q15147 1175 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 NECTIN1Q15223 517 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 SPOUT1Q5T280 376 aaKnown RBP14.1□□□□□ -0.15
MRPL55-209ENST00000366735 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 NIPA1Q7RTP0 329 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 LRRC2Q9BYS8 371 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 IGFLR1Q9H665 355 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 AGO3Q9H9G7 860 aaKnown RBP14.1□□□□□ -0.15
MRPL55-209ENST00000366735 C1orf112Q9NSG2 853 aa14.1□□□□□ -0.15
MRPL55-209ENST00000366735 MRPL42Q9Y6G3 142 aaKnown RBP14.1□□□□□ -0.15
MRPL55-209ENST00000366735 DENND3A2RUS2 1198 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 CSPG5O95196 566 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 SRGAP2BP0DMP2 458 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 SREBF1P36956 1147 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 SARSP49591 514 aaKnown RBP14.09□□□□□ -0.15
MRPL55-209ENST00000366735 PSEN1P49768 467 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 RCAN1P53805 252 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 SETQ01105 290 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-209ENST00000366735 TMEM62Q0P6H9 643 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 NFX1Q12986 1120 aaKnown RBP14.09□□□□□ -0.15
MRPL55-209ENST00000366735 KRT32Q14532 448 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 CLUL1Q15846 466 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 PAN2Q504Q3 1202 aaKnown RBP14.09□□□□□ -0.15
MRPL55-209ENST00000366735 MIS18BP1Q6P0N0 1132 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 MTHFD1LQ6UB35 978 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 CCDC12Q8WUD4 166 aaPredicted RBP14.09□□□□□ -0.15
MRPL55-209ENST00000366735 LINC01599Q8WXQ3 324 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 NEK1Q96PY6 1258 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 PCYT2Q99447 389 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
MRPL55-209ENST00000366735 ALG13Q9NP73 1137 aaKnown RBP14.09□□□□□ -0.15
MRPL55-209ENST00000366735 PLAGL2Q9UPG8 496 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 PCDHB7Q9Y5E2 793 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 PCDHB12Q9Y5F1 795 aa14.09□□□□□ -0.15
MRPL55-209ENST00000366735 MUC6Q6W4X9 2439 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 CCDC196A0A1B0GTZ2 297 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 SMCO2A6NFE2 343 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 GOLGA8AA7E2F4 631 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 GOLGA8BA8MQT2 603 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 STXBP3O00186 592 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 TBX10O75333 385 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 RPS6KA5O75582 802 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 HMGB1P09429 215 aaKnown RBP14.08□□□□□ -0.16
MRPL55-209ENST00000366735 LTBRP36941 435 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 FGD1P98174 961 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 UBE3AQ05086 875 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 CKAP2LQ8IYA6 745 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 ATP8B4Q8TF62 1192 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 TRAPPC12Q8WVT3 735 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 ZNF302Q9NR11 478 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 BARHL2Q9NY43 387 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 CEP131Q9UPN4 1083 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 GINS2Q9Y248 185 aa14.08□□□□□ -0.16
MRPL55-209ENST00000366735 DDX39AO00148 427 aaKnown RBP14.07□□□□□ -0.16
MRPL55-209ENST00000366735 GPR182O15218 404 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 ATG7O95352 703 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 ITGB1P05556 798 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 ARP10275 920 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 IRS1P35568 1242 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 ITGB3BPQ13352 177 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-209ENST00000366735 ZNF484Q5JVG2 852 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 PDXDC2PQ6P474 469 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 DHX32Q7L7V1 743 aaKnown RBP14.07□□□□□ -0.16
MRPL55-209ENST00000366735 SMAP1Q8IYB5 467 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-209ENST00000366735 EFHBQ8N7U6 833 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 KLHL23Q8NBE8 558 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 POF1BQ8WVV4 589 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 PGBD1Q96JS3 809 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 MFSD14AQ96MC6 490 aa14.07□□□□□ -0.16
MRPL55-209ENST00000366735 IPO9Q96P70 1041 aaKnown RBP14.07□□□□□ -0.16
MRPL55-209ENST00000366735 C5orf42Q9H799 3197 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 ZNF318Q5VUA4 2279 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 IGKV6D-21A0A0A0MT36 114 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 RBAK-RBAKDNI3L0D1 243 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 MEIS1O00470 390 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 HOXA2O43364 376 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 IBSPP21815 317 aaPredicted RBP14.06□□□□□ -0.16
MRPL55-209ENST00000366735 KLRC1P26715 233 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 CLK2P49760 499 aaKnown RBP14.06□□□□□ -0.16
MRPL55-209ENST00000366735 ADAM15Q13444 863 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 HERC4Q5GLZ8 1057 aaPredicted RBP14.06□□□□□ -0.16
MRPL55-209ENST00000366735 PDE12Q6L8Q7 609 aaKnown RBP14.06□□□□□ -0.16
MRPL55-209ENST00000366735 SLC24A5Q71RS6 500 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 PLA2G4DQ86XP0 818 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 CRIPAKQ8N1N5 446 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 ZNF710Q8N1W2 664 aa14.06□□□□□ -0.16
MRPL55-209ENST00000366735 CYP2W1Q8TAV3 490 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms