RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SMARCE1Q969G3 411 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 PCYT2Q99447 389 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 AZI2Q9H6S1 392 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 DBR1Q9UK59 544 aaKnown RBP22.99■■□□□ 1.27
SHISA4-201ENST00000362011 Q9Y3F1 56 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 MAFBQ9Y5Q3 323 aaPredicted RBP22.99■■□□□ 1.27
SHISA4-201ENST00000362011 EVPLQ92817 2033 aa22.99■■□□□ 1.27
SHISA4-201ENST00000362011 DYNC1LI2O43237 492 aaPredicted RBP22.98■■□□□ 1.27
SHISA4-201ENST00000362011 STAT5BP51692 787 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 PRKCEQ02156 737 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 CUL4BQ13620 913 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 UTP14CQ5TAP6 766 aaKnown RBP22.98■■□□□ 1.27
SHISA4-201ENST00000362011 GPBP1Q86WP2 473 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 CCDC43Q96MW1 224 aaKnown RBP22.98■■□□□ 1.27
SHISA4-201ENST00000362011 C7orf25Q9BPX7 421 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 AP5M1Q9H0R1 490 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 BLZF1Q9H2G9 400 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 BHMT2Q9H2M3 363 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 ANKEF1Q9NU02 776 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 TUBE1Q9UJT0 475 aa22.98■■□□□ 1.27
SHISA4-201ENST00000362011 ARHGEF35A5YM69 484 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 SEPT4O43236 478 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 ZNF862O60290 1169 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 CASP1P29466 404 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 CNGA1P29973 690 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 YWHABP31946 246 aaKnown RBP22.97■■□□□ 1.27
SHISA4-201ENST00000362011 MAGEA10P43363 369 aaPredicted RBP22.97■■□□□ 1.27
SHISA4-201ENST00000362011 ZNF445P59923 1031 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 SASS6Q6UVJ0 657 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 OTUD6AQ7L8S5 288 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 TRIM9Q9C026 710 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 PCDHA5Q9Y5H7 936 aa22.97■■□□□ 1.27
SHISA4-201ENST00000362011 MYMKA6NI61 221 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 DLL1O00548 723 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 ZBTB39O15060 712 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 DUSP11O75319 330 aaKnown RBP22.96■■□□□ 1.27
SHISA4-201ENST00000362011 MMP3P08254 477 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 CYP11B2P19099 503 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 XKR3Q5GH77 459 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 PLPPR4Q7Z2D5 763 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 TDHQ8IZJ6 230 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 GLG1Q92896 1179 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 LENG1Q96BZ8 264 aaPredicted RBP22.96■■□□□ 1.27
SHISA4-201ENST00000362011 SMARCAD1Q9H4L7 1026 aa22.96■■□□□ 1.27
SHISA4-201ENST00000362011 BMP2KQ9NSY1 1161 aaPredicted RBP22.96■■□□□ 1.27
SHISA4-201ENST00000362011 STBD1O95210 358 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 OATP04181 439 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 SYN1P17600 705 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 RARRES1P49788 294 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 ASIC1P78348 528 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 XKR9Q5GH70 373 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 CNNM4Q6P4Q7 775 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 LRSAM1Q6UWE0 723 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 SPATA20Q8TB22 786 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 CCDC47Q96A33 483 aaKnown RBP22.95■■□□□ 1.26
SHISA4-201ENST00000362011 FAM167AQ96KS9 214 aa22.95■■□□□ 1.26
SHISA4-201ENST00000362011 SEPT9Q9UHD8 586 aaPredicted RBP22.95■■□□□ 1.26
SHISA4-201ENST00000362011 PPFIA4O75335 1185 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 RPN1P04843 607 aaKnown RBP22.94■■□□□ 1.26
SHISA4-201ENST00000362011 LGALS2P05162 132 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 HOXD8P13378 290 aaPredicted RBP22.94■■□□□ 1.26
SHISA4-201ENST00000362011 ATP4AP20648 1035 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 CCND3P30281 292 aaPredicted RBP22.94■■□□□ 1.26
SHISA4-201ENST00000362011 SARSP49591 514 aaKnown RBP22.94■■□□□ 1.26
SHISA4-201ENST00000362011 CPT1AP50416 773 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 SLC26A2P50443 739 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 DGKDQ16760 1214 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 BRDTQ58F21 947 aaPredicted RBP22.94■■□□□ 1.26
SHISA4-201ENST00000362011 NT5DC1Q5TFE4 455 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 DYMQ7RTS9 669 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 TRMT1LQ7Z2T5 733 aaKnown RBP22.94■■□□□ 1.26
SHISA4-201ENST00000362011 DDX12PQ92771 950 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 GSDMAQ96QA5 445 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 NRBP2Q9NSY0 501 aa22.94■■□□□ 1.26
SHISA4-201ENST00000362011 A6NJR5 290 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 KRT18P05783 430 aaKnown RBP22.93■■□□□ 1.26
SHISA4-201ENST00000362011 CCDC192P0DO97 292 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 PLA2G4FQ68DD2 849 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 RINT1Q6NUQ1 792 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 ANO5Q75V66 913 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 TRIM50Q86XT4 487 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 RMND1Q9NWS8 449 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 KCND2Q9NZV8 630 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 MAN1B1Q9UKM7 699 aa22.93■■□□□ 1.26
SHISA4-201ENST00000362011 TRIP12Q14669 1992 aaPredicted RBP22.93■■□□□ 1.26
SHISA4-201ENST00000362011 TMEM150BA6NC51 233 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 RARBP10826 455 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 GJA9P57773 515 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 TYRO3Q06418 890 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 ARSHQ5FYA8 562 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 PADI6Q6TGC4 694 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 TRIML1Q8N9V2 468 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 DNAJC19Q96DA6 116 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 FUCA2Q9BTY2 467 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 RUSC1Q9BVN2 902 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 UPF3AQ9H1J1 476 aaKnown RBP22.92■■□□□ 1.26
SHISA4-201ENST00000362011 SPC25Q9HBM1 224 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 ERAP1Q9NZ08 941 aa22.92■■□□□ 1.26
SHISA4-201ENST00000362011 PVALEFA0A1B0GWK0 134 aa22.91■■□□□ 1.26
SHISA4-201ENST00000362011 BIN1O00499 593 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms