RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CLTAP09496 248 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 PKN1Q16512 942 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 EFCAB13Q8IY85 973 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 MCUR1Q96AQ8 359 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 ZNF211Q13398 564 aaPredicted RBP17.66■□□□□ 0.42
SCAF1-201ENST00000360565 LGSNQ5TDP6 509 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 PPFIBP2Q8ND30 876 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 DNAJC17Q9NVM6 304 aaKnown RBP17.66■□□□□ 0.42
SCAF1-201ENST00000360565 MAD2L2Q9UI95 211 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 HMGB1P1B2RPK0 211 aaPredicted RBP17.66■□□□□ 0.42
SCAF1-201ENST00000360565 P4HA1P13674 534 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 BAG6P46379 1132 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 SNX16P57768 344 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 PPP2R5DQ14738 602 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 EARS2Q5JPH6 523 aaKnown RBP17.66■□□□□ 0.42
SCAF1-201ENST00000360565 ZNF746Q6NUN9 644 aaPredicted RBP17.66■□□□□ 0.42
SCAF1-201ENST00000360565 SEPT14Q6ZU15 432 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 CCDC197Q8NCU1 140 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 BBOF1Q8ND07 529 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 NWD1Q149M9 1564 aa17.66■□□□□ 0.42
SCAF1-201ENST00000360565 A0A1B0GUA9 196 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 IPO5O00410 1097 aaKnown RBP17.65■□□□□ 0.42
SCAF1-201ENST00000360565 ZSCAN20P17040 1043 aaPredicted RBP17.65■□□□□ 0.42
SCAF1-201ENST00000360565 YARSP54577 528 aaKnown RBP17.65■□□□□ 0.42
SCAF1-201ENST00000360565 INO80B-WBP1J3KQ70 363 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 HSPA1LP34931 641 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 ALCAMQ13740 583 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 INO80BQ9C086 356 aaPredicted RBP17.65■□□□□ 0.42
SCAF1-201ENST00000360565 CD2APQ9Y5K6 639 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 GOLGA8SH3BPF8 625 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 NMT1P30419 496 aaKnown RBP17.65■□□□□ 0.42
SCAF1-201ENST00000360565 ERVK-24P63145 666 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 PLCD3Q8N3E9 789 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 TRIM11Q96F44 468 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 RMDN3Q96TC7 470 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 MYO5BQ9ULV0 1848 aa17.65■□□□□ 0.42
SCAF1-201ENST00000360565 RASGRF2O14827 1237 aa17.64■□□□□ 0.42
SCAF1-201ENST00000360565 MTMR1Q13613 665 aa17.64■□□□□ 0.42
SCAF1-201ENST00000360565 TACO1Q9BSH4 297 aaKnown RBP17.64■□□□□ 0.42
SCAF1-201ENST00000360565 ABCB11O95342 1321 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 GPR75-ASB3A0A0A6YYF3 556 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 PCK1P35558 622 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 IGBP1P78318 339 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 GADL1Q6ZQY3 521 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 MS4A14Q96JA4 679 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 TBK1Q9UHD2 729 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 ANAPC5Q9UJX4 755 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 SLC16A4O15374 487 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 MAN1A1P33908 653 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 TFAMQ00059 246 aaKnown RBP17.64■□□□□ 0.41
SCAF1-201ENST00000360565 GRM1Q13255 1194 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 PDXDC2PQ6P474 469 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 EEPD1Q7L9B9 569 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 VPS52Q8N1B4 723 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 CDHR1Q96JP9 859 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 SMARCAL1Q9NZC9 954 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 SUGT1Q9Y2Z0 365 aa17.64■□□□□ 0.41
SCAF1-201ENST00000360565 SSU72P8A0A1W2PR75 194 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 ACTN1P12814 892 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 RWDD2BP57060 319 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 PPP4CP60510 307 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 NEDD9Q14511 834 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 SLC18A3Q16572 532 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 RIN2Q8WYP3 895 aaPredicted RBP17.63■□□□□ 0.41
SCAF1-201ENST00000360565 JMJD4Q9H9V9 463 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 AFF2P51816 1311 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 ZNF233A6NK53 670 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 NDC80O14777 642 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 NDUFB10O96000 172 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 ARL1P40616 181 aaPredicted RBP17.63■□□□□ 0.41
SCAF1-201ENST00000360565 CCDC62Q6P9F0 684 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 TTLL6Q8N841 843 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 CCDC110Q8TBZ0 833 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 RNF34Q969K3 372 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 LXNQ9BS40 222 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 TARSL2A2RTX5 802 aaKnown RBP17.63■□□□□ 0.41
SCAF1-201ENST00000360565 ZNF18P17022 549 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 PHBP35232 272 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 KRT81Q14533 505 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 RNF207Q6ZRF8 634 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 RAVER2Q9HCJ3 691 aaKnown RBP17.63■□□□□ 0.41
SCAF1-201ENST00000360565 NXF1Q9UBU9 619 aaKnown RBP17.63■□□□□ 0.41
SCAF1-201ENST00000360565 PALM3A6NDB9 673 aaPredicted RBP17.63■□□□□ 0.41
SCAF1-201ENST00000360565 K7ERI5 159 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 PDXKO00764 312 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 TROVE2P10155 538 aaKnown RBP eCLIP17.63■□□□□ 0.41
SCAF1-201ENST00000360565 CD58P19256 250 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 SLMAPQ14BN4 828 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 FRMD5Q7Z6J6 570 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 SEL1LQ9UBV2 794 aa17.63■□□□□ 0.41
SCAF1-201ENST00000360565 FAM205AQ6ZU69 1335 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 I3L4J1 428 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 SGK1O00141 431 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 STK10O94804 968 aaKnown RBP17.62■□□□□ 0.41
SCAF1-201ENST00000360565 SUN1O94901 812 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 ACSL3O95573 720 aa17.62■□□□□ 0.41
SCAF1-201ENST00000360565 CLNS1AP54105 237 aaKnown RBP17.62■□□□□ 0.41
SCAF1-201ENST00000360565 EIF3BP55884 814 aaKnown RBP17.62■□□□□ 0.41
SCAF1-201ENST00000360565 SH2D3AQ9BRG2 576 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms