RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 LRP2BPQ9P2M1 347 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 SLIT1O75093 1534 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 TMEM120BA0PK00 339 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 CBX6O95503 412 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 MYBP10242 640 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 ALADP13716 330 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 PLCG2P16885 1265 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 YY1P25490 414 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 GBP1P32455 592 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 MMP13P45452 471 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 CABP4P57796 275 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 BNIP1Q12981 228 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 RASA3Q14644 834 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 SLMAPQ14BN4 828 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 UBE3CQ15386 1083 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 RASIP1Q5U651 963 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 SPTY2D1Q68D10 685 aaPredicted RBP9.34□□□□□ -0.91
CD46-206ENST00000360212 CCDC84Q86UT8 332 aaPredicted RBP9.34□□□□□ -0.91
CD46-206ENST00000360212 ATL2Q8NHH9 583 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 SCFD2Q8WU76 684 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 DNAJC9Q8WXX5 260 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 ERP27Q96DN0 273 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 ERVK-5Q9HDB9 667 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 SEPT11Q9NVA2 429 aaKnown RBP9.34□□□□□ -0.91
CD46-206ENST00000360212 TMOD4Q9NZQ9 345 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 WDR35Q9P2L0 1181 aa9.34□□□□□ -0.91
CD46-206ENST00000360212 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.34□□□□□ -0.92
CD46-206ENST00000360212 MYH1P12882 1939 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 TCRBV5S4A2TA0A5A2 114 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 TMEM110-MUSTN1A8MSY1 372 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 CREB3O43889 395 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 LONP1P36776 959 aaKnown RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 MGAT5Q09328 741 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 FUT2Q10981 343 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 CNGA2Q16280 664 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 SLC18A3Q16572 532 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 BICDL1Q6ZP65 573 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 ZSCAN29Q8IWY8 852 aaPredicted RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 C1orf131Q8NDD1 294 aaKnown RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 TTLL11Q8NHH1 800 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 SH3RF3Q8TEJ3 882 aaPredicted RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 GJA10Q969M2 543 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 MRRFQ96E11 262 aaKnown RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 SLX1AQ9BQ83 275 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 EPB41L4BQ9H329 900 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 OSGEPQ9NPF4 335 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 ARHGEF3Q9NR81 526 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 KBTBD4Q9NVX7 518 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 ANKIB1Q9P2G1 1089 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 MYH7P12883 1935 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 DIP2CQ9Y2E4 1556 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 BCL9LQ86UU0 1499 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 PRPF3O43395 683 aaKnown RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 LCA5LO95447 670 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 GCP02774 474 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 SERPING1P05155 500 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 SCG2P13521 617 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 HNRNPH3P31942 346 aaKnown RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 PEX5P50542 639 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 DR1Q01658 176 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 RASGRF1Q13972 1273 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 MYBPC3Q14896 1274 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 BARGINQ6ZT62 677 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 HEATR3Q7Z4Q2 680 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 ESR2Q92731 530 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 ZSCAN10Q96SZ4 725 aaPredicted RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 RANBP17Q9H2T7 1088 aaKnown RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 ATP6V0A2Q9Y487 856 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 CCDC169A6NNP5 214 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 RASGRF2O14827 1237 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 CYP27B1O15528 508 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 CIAO1O76071 339 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 NOL4O94818 638 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 TXKP42681 527 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 USP11P51784 963 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 PLS1Q14651 629 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 ASIC2Q16515 512 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 PIGOQ8TEQ8 1089 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 ATP8B4Q8TF62 1192 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 KIFAP3Q92845 792 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 C18orf8Q96DM3 657 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 CRAMP1Q96RY5 1269 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 RNPEPL1Q9HAU8 725 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 PREBQ9HCU5 417 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 LUC7LQ9NQ29 371 aaKnown RBP9.33□□□□□ -0.92
CD46-206ENST00000360212 TCP11L1Q9NUJ3 509 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 TMEM59LQ9UK28 342 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 ASAP1Q9ULH1 1129 aa9.33□□□□□ -0.92
CD46-206ENST00000360212 CCNT1O60563 726 aaKnown RBP9.32□□□□□ -0.92
CD46-206ENST00000360212 PEX11AO75192 247 aa9.32□□□□□ -0.92
CD46-206ENST00000360212 KCNA6P17658 529 aa9.32□□□□□ -0.92
CD46-206ENST00000360212 KCNA3P22001 575 aa9.32□□□□□ -0.92
CD46-206ENST00000360212 CALB2P22676 271 aa9.32□□□□□ -0.92
CD46-206ENST00000360212 BCAMP50895 628 aa9.32□□□□□ -0.92
CD46-206ENST00000360212 DEUP1Q05D60 604 aa9.32□□□□□ -0.92
CD46-206ENST00000360212 CCDC15Q0P6D6 951 aa9.32□□□□□ -0.92
CD46-206ENST00000360212 UBE4AQ14139 1066 aa9.32□□□□□ -0.92
CD46-206ENST00000360212 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms