RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 C1QTNF8P60827 252 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 NCAPH2Q6IBW4 605 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 POTEBQ6S5H4 581 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 PLEKHH3Q7Z736 793 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 CCDC51Q96ER9 411 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 NAA15Q9BXJ9 866 aaKnown RBP15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 VPS16Q9H269 839 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 RNF186Q9NXI6 227 aa15.31■□□□□ 0.04
CSNK1E-201ENST00000359867 E9PMD0 336 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 POLR3GO15318 223 aaPredicted RBP15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 FGFR1OPO95684 399 aaKnown RBP15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 ARP10275 920 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 IDEP14735 1019 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 HSPA6P17066 643 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 EEPD1Q7L9B9 569 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 CATSPER3Q86XQ3 398 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 CCDC65Q8IXS2 484 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 PPP2R2CQ9Y2T4 447 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 PHLPP2Q6ZVD8 1323 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 CCND2P30279 289 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 SETQ01105 290 aaPredicted RBP15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 VSIG10LQ86VR7 867 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 DNERQ8NFT8 737 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 WDR24Q96S15 920 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 MXRA8Q9BRK3 442 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 DESI2Q9BSY9 194 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 PANK4Q9NVE7 773 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 DNM3Q9UQ16 869 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 A0A1W2PQC6 194 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 LGALS16A8MUM7 142 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 SPATA31C1P0DKV0 1188 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 LRRC63Q05C16 580 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 RBL2Q08999 1139 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 COASYQ13057 564 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 GRB14Q14449 540 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 TOGARAM2Q6ZUX3 1019 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 CNGA4Q8IV77 575 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 SLC5A5Q92911 643 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 SEMA6BQ9H3T3 888 aa15.3■□□□□ 0.04
CSNK1E-201ENST00000359867 STRNO43815 780 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 CYP11B2P19099 503 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 MUTP22033 750 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 CYP2C19P33261 490 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 SLC12A3P55017 1021 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 CAP1Q01518 475 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 PPP2R5CQ13362 524 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 TMCO3Q6UWJ1 677 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 DPP9Q86TI2 863 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 GPBP1Q86WP2 473 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 SYT2Q8N9I0 419 aaPredicted RBP15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 UBIAD1Q9Y5Z9 338 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 MEIS1O00470 390 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 TNPO2O14787 897 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 CLGNO14967 610 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 ZSCAN12O43309 604 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 TADA3O75528 432 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 PSMD10O75832 226 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 RGS20O76081 388 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 DNM2P50570 870 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 GNG11P61952 73 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 UBXN1Q04323 297 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 TEX35Q5T0J7 233 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 MAF1Q9H063 256 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 TUFT1Q9NNX1 390 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 KCNH7Q9NS40 1196 aa15.29■□□□□ 0.04
CSNK1E-201ENST00000359867 THSD7BQ9C0I4 1608 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 KIAA1217Q5T5P2 1943 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 FRMD3A2A2Y4 597 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 MFAP3LO75121 409 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 SSBP05455 408 aaKnown RBP eCLIP15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 MTMR1Q13613 665 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 FAM26FQ5R3K3 315 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 OTOP1Q7RTM1 612 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 CREBRFQ8IUR6 639 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 ABRAQ8N0Z2 381 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 ZNF507Q8TCN5 953 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 HPS3Q969F9 1004 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 TUBGCP2Q9BSJ2 902 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 HTTP42858 3142 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 ZNF792Q3KQV3 632 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 LRCH2Q5VUJ6 765 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 NIPA1Q7RTP0 329 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 MYOCDQ8IZQ8 938 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 TSG101Q99816 390 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 TSKSQ9UJT2 592 aa15.28■□□□□ 0.04
CSNK1E-201ENST00000359867 LRRC37A2A6NM11 1700 aa15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 GYPCP04921 128 aa15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 FECHP22830 423 aa15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 GTF2A1P52655 376 aaPredicted RBP15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 LACTBP83111 547 aaPredicted RBP15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 MTF1Q14872 753 aa15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 STXBP2Q15833 593 aa15.27■□□□□ 0.04
CSNK1E-201ENST00000359867 NPLOC4Q8TAT6 608 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms