RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ECHS1P30084 290 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 SEPT7Q16181 437 aaKnown RBP12.38□□□□□ -0.43
CNOT3-202ENST00000358389 H2AFVQ71UI9 128 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 PIGWQ7Z7B1 504 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 SEMA4AQ9H3S1 761 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 MRC1P22897 1456 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 GSTTP1A0A1W2PQM5 241 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 MYL1P05976 194 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 ALDH3A1P30838 453 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 ERFP50548 548 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 LONRF1Q17RB8 773 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 ZNF513Q8N8E2 541 aaPredicted RBP12.38□□□□□ -0.43
CNOT3-202ENST00000358389 KIAA0895Q8NCT3 520 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 EPAS1Q99814 870 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
CNOT3-202ENST00000358389 TARSP26639 723 aaKnown RBP12.37□□□□□ -0.43
CNOT3-202ENST00000358389 PABPC3Q9H361 631 aaKnown RBP12.37□□□□□ -0.43
CNOT3-202ENST00000358389 SLITRK6Q9H5Y7 841 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 NKX1-2Q9UD57 310 aaPredicted RBP12.37□□□□□ -0.43
CNOT3-202ENST00000358389 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 TECPR2O15040 1411 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 FAM205AQ6ZU69 1335 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 TMEM120BA0PK00 339 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 LDHCP07864 332 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 ACTN1P12814 892 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 BCAMP50895 628 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 ANO7Q6IWH7 933 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
CNOT3-202ENST00000358389 COL4A3BPQ9Y5P4 624 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 AKAP12Q02952 1782 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 OR52Z1P0C646 297 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 SERPINB4P48594 390 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 TUBP50607 506 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 HGSNATQ68CP4 663 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 SYCP3Q8IZU3 236 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 SCFD2Q8WU76 684 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 CENPTQ96BT3 561 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 ERP27Q96DN0 273 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 HAO1Q9UJM8 370 aa12.37□□□□□ -0.43
CNOT3-202ENST00000358389 ANKRD33BA6NCL7 494 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 TLR2O60603 784 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 AGTP01019 485 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
CNOT3-202ENST00000358389 PTK2Q05397 1052 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 TRIM74Q86UV6 250 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 TRIM73Q86UV7 250 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 CCDC105Q8IYK2 499 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 SYT15Q9BQS2 421 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 TXLNGQ9NUQ3 528 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 CHCHD3Q9NX63 227 aaKnown RBP12.36□□□□□ -0.43
CNOT3-202ENST00000358389 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 USP17L12C9JPN9 530 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 USP17L21D6R901 530 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 CREB3O43889 395 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 EIF6P56537 245 aaKnown RBP12.36□□□□□ -0.43
CNOT3-202ENST00000358389 MYOCDQ8IZQ8 938 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 FITM2Q8N6M3 262 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 ATXN2LQ8WWM7 1075 aaKnown RBP12.36□□□□□ -0.43
CNOT3-202ENST00000358389 TLCD1Q96CP7 247 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 MRRFQ96E11 262 aaKnown RBP12.36□□□□□ -0.43
CNOT3-202ENST00000358389 NAP1L3Q99457 506 aaPredicted RBP12.36□□□□□ -0.43
CNOT3-202ENST00000358389 PITPNM3Q9BZ71 974 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 FOXO6A8MYZ6 492 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 LIN7AO14910 233 aaPredicted RBP12.36□□□□□ -0.43
CNOT3-202ENST00000358389 LCA5LO95447 670 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 PUM3Q15397 648 aaKnown RBP12.36□□□□□ -0.43
CNOT3-202ENST00000358389 BARGINQ6ZT62 677 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 PPFIBP2Q8ND30 876 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 ACTRT1Q8TDG2 376 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 PIGOQ8TEQ8 1089 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 GORASP1Q9BQQ3 440 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 CUEDC2Q9H467 287 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 PCDHA4Q9UN74 947 aa12.36□□□□□ -0.43
CNOT3-202ENST00000358389 PLCG2P16885 1265 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 CNGA1P29973 690 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 MMP13P45452 471 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 FKBP3Q00688 224 aaKnown RBP12.35□□□□□ -0.43
CNOT3-202ENST00000358389 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 CALCOCO2Q13137 446 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 HHATQ5VTY9 493 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 APBB1IPQ7Z5R6 666 aaPredicted RBP12.35□□□□□ -0.43
CNOT3-202ENST00000358389 DTX3LQ8TDB6 740 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 LRRC8CQ8TDW0 803 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 METTL5Q9NRN9 209 aaKnown RBP12.35□□□□□ -0.43
CNOT3-202ENST00000358389 TROAPQ12815 778 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 LRP10Q7Z4F1 713 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 SYCE1Q8N0S2 351 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 GLIS3Q8NEA6 775 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 TCRBV5S4A2TA0A5A2 114 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 A6NHS1 94 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 CALB2P22676 271 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 DYNLL1P63167 89 aaKnown RBP12.35□□□□□ -0.43
CNOT3-202ENST00000358389 TNIP1Q15025 636 aa12.35□□□□□ -0.43
CNOT3-202ENST00000358389 SEC23AQ15436 765 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms