RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CKAP4Q07065 602 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 P3H1Q32P28 736 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 DUS1LQ6P1R4 473 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 CD302Q8IX05 232 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 RNF168Q8IYW5 571 aaPredicted RBP10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 MMGT1Q8N4V1 131 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 NSUN7Q8NE18 718 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 CAGE1Q8TC20 777 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 DCPSQ96C86 337 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 ABHD8Q96I13 439 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 PCDH18Q9HCL0 1135 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 MYOZ2Q9NPC6 264 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 UTP6Q9NYH9 597 aaKnown RBP10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 SUGT1Q9Y2Z0 365 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 PCDHAC2Q9Y5I4 1007 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 MYH7P12883 1935 aa10.14□□□□□ -0.79
SMARCAL1-202ENST00000358207 ZMYM6O95789 1325 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 TRAF5O00463 557 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 HNRNPRO43390 633 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 PFDN1O60925 122 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 GNA14O95837 355 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 PCK1P35558 622 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 STK38Q15208 465 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 SMUG1Q53HV7 270 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 CYB5R4Q7L1T6 521 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 FBXO33Q7Z6M2 555 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 C2orf69Q8N8R5 385 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 ATP11CQ8NB49 1132 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 NEK9Q8TD19 979 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 TRAPPC9Q96Q05 1148 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 DSCC1Q9BVC3 393 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 HSFX1Q9UBD0 423 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 ATAD5Q96QE3 1844 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 hCG_1642624A0A1W2PR95 340 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 HMGB1P1B2RPK0 211 aaPredicted RBP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 ATP6V1C1P21283 382 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 SARSP49591 514 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 OXCT1P55809 520 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 NCALDP61601 193 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 MFSD14BQ5SR56 506 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 DHX32Q7L7V1 743 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 METTL16Q86W50 562 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 PPFIBP1Q86W92 1011 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 KIF2BQ8N4N8 673 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 DYDC1Q8WWB3 177 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 TEKT1Q969V4 418 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 CLIP3Q96DZ5 547 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 ABT1Q9ULW3 272 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 DDX60LQ5H9U9 1706 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 KLF18A0A0U1RQI7 1052 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 USP17L12C9JPN9 530 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 USP17L21D6R901 530 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 IPO5O00410 1097 aaKnown RBP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 IGF2BP3O00425 579 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 NMT2O60551 498 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 RAD17O75943 681 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 CDC25AP30304 524 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 LBX1P52954 281 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 CACNB3P54284 484 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 KLC1Q07866 573 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 PAK2Q13177 524 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 CPLX4Q7Z7G2 160 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 LMNTD2Q8IXW0 634 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 TMBIM4Q9HC24 238 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 PCDHA5Q9Y5H7 936 aa10.13□□□□□ -0.79
SMARCAL1-202ENST00000358207 EIF3FO00303 357 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 SPTLC2O15270 562 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 TMCC1O94876 653 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 SLC34A2O95436 690 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 RARAP10276 462 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 PICALMQ13492 652 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 IFI16Q16666 785 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 FAM47AQ5JRC9 791 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 HAUS3Q68CZ6 603 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 SYNE3Q6ZMZ3 975 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CCNJLQ8IV13 435 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 MAPKAPK5Q8IW41 473 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 SLC44A5Q8NCS7 719 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 RNF25Q96BH1 459 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 NSUN4Q96CB9 384 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CHP1Q99653 195 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 TRAIPQ9BWF2 469 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CD209Q9NNX6 404 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 GPCPD1Q9NPB8 672 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 SMARCAL1Q9NZC9 954 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 ZSCAN5CA6NGD5 496 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 GOLGA8BA8MQT2 603 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 FLOT1O75955 427 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 HOXD12P35452 270 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CCNFP41002 786 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 MATR3P43243 847 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CARSP49589 748 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 ANTXR2P58335 489 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 MCL1Q07820 350 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms