RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 STIM1Q13586 685 aa11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 NTRK3Q16288 839 aa11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 NSUN7Q8NE18 718 aaKnown RBP11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 OR8K1Q8NGG5 319 aa11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 CCDC12Q8WUD4 166 aaPredicted RBP11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 PHKBQ93100 1093 aa11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
HIST4H4-201ENST00000358064 GOLGA6CA6NDK9 693 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 PDLIM1O00151 329 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 KIF5CO60282 957 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 N4BP1O75113 896 aaKnown RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 GOLGA6DP0CG33 693 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 BMP3P12645 472 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 NR6A1Q15406 480 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 COL13A1Q5TAT6 717 aaPredicted RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 SRBD1Q8N5C6 995 aaKnown RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 IGSF22Q8N9C0 903 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 TTC13Q8NBP0 860 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 MIPOL1Q8TD10 442 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 LPAR1Q92633 364 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 DHX58Q96C10 678 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 SLC26A6Q9BXS9 759 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 GOLGA6AQ9NYA3 693 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 CPA4Q9UI42 421 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 RCOR1Q9UKL0 485 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 SLC45A1Q9Y2W3 748 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 MYH15Q9Y2K3 1946 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 HTTP42858 3142 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 GOLGA6L10A6NI86 522 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 ANKRD65E5RJM6 399 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 CAND2O75155 1236 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 RTN3O95197 1032 aaPredicted RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 EPB41P11171 864 aaKnown RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 IFNAR1P17181 557 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 VCAM1P19320 739 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 SLC16A2P36021 539 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 ZNF76P36508 570 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 IKQ13123 557 aaPredicted RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 CRELD2Q6UXH1 353 aaPredicted RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 SMARCC2Q8TAQ2 1214 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 ASCC2Q9H1I8 757 aaPredicted RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 CORO1CQ9ULV4 474 aaPredicted RBP11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 HPCAL4Q9UM19 191 aa11.86□□□□□ -0.51
HIST4H4-201ENST00000358064 TMEM232C9JQI7 657 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 FKTNO75072 461 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 CCDC175P0C221 793 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 CD151P48509 253 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 RAB27AP51159 221 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 SP3Q02447 781 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 FUT2Q10981 343 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 ZFYVE27Q5T4F4 411 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 VSTM4Q8IW00 320 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 TRIM22Q8IYM9 498 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 COG1Q8WTW3 980 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 ZFAND2BQ8WV99 257 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 PGBD1Q96JS3 809 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 C12orf42Q96LP6 360 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 SH3GL2Q99962 352 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 LZTS2Q9BRK4 669 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 VAT1LQ9HCJ6 419 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 RNF19AQ9NV58 838 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 PARP2Q9UGN5 583 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 PNMA2Q9UL42 364 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 CNTNAP5Q8WYK1 1306 aa11.85□□□□□ -0.51
HIST4H4-201ENST00000358064 hCG_1642624A0A1W2PR95 340 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 CTAGE9A4FU28 777 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 CYTH3O43739 400 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 LUC7L3O95232 432 aaKnown RBP11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 FMNL1O95466 1100 aaPredicted RBP11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 FDPSP14324 419 aaKnown RBP11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 FERP16591 822 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 HOXA7P31268 230 aaPredicted RBP11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 NLRP12P59046 1061 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 AKAP17AQ02040 695 aaKnown RBP11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 APBA1Q02410 837 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 NCOA4Q13772 614 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 SLC35G1Q2M3R5 365 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 MMTAG2Q9BU76 263 aaKnown RBP11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 PCDHGA10Q9Y5H3 936 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 V9GY48 417 aaPredicted RBP11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 LOC285556D6RIA3 1793 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 A0A1W2PQ27 194 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 A0A1W2PQ64 194 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 A0A1W2PQD8 194 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 NDUFAB1O14561 156 aa11.84□□□□□ -0.51
HIST4H4-201ENST00000358064 GCLCP48506 637 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms