RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 NOVA2Q9UNW9 492 aaKnown RBP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 CCDC88AQ3V6T2 1871 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 GOLGA6L10A0A0M3HER8 536 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 ADAMTS3O15072 1205 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 SART1O43290 800 aaKnown RBP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 GBP1P32455 592 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 BCAMP50895 628 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 NONOQ15233 471 aaKnown RBP eCLIP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 MMTAG2Q9BU76 263 aaKnown RBP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 ZC3H12CQ9C0D7 883 aaKnown RBP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-205ENST00000357568 C15orf41Q9Y2V0 281 aa11.61□□□□□ -0.55
CAPN3-205ENST00000357568 PSME4Q14997 1843 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 GFPT2O94808 682 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 SMARCA1P28370 1054 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 MMP13P45452 471 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 ZNF131P52739 623 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 MAGOHP61326 146 aaKnown RBP11.6□□□□□ -0.55
CAPN3-205ENST00000357568 ASIC2Q16515 512 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 INF2Q27J81 1249 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 KLHL7Q8IXQ5 586 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 GBP7Q8N8V2 638 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-205ENST00000357568 MAGOHBQ96A72 148 aaKnown RBP11.6□□□□□ -0.55
CAPN3-205ENST00000357568 PLCD4Q9BRC7 762 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 RAB17Q9H0T7 212 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 NENFQ9UMX5 172 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 SH3BP1Q9Y3L3 701 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-205ENST00000357568 BAZ2AQ9UIF9 1905 aaKnown RBP11.6□□□□□ -0.55
CAPN3-205ENST00000357568 KCNK3O14649 394 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 LMNB1P20700 586 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 TMOD1P28289 359 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 KRT71Q3SY84 523 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 ZNF804AQ7Z570 1209 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 FBXO33Q7Z6M2 555 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 UBLCP1Q8WVY7 318 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-205ENST00000357568 TBC1D5Q92609 795 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 STMN4Q9H169 189 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-205ENST00000357568 SLC39A2Q9NP94 309 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 KCNMB3Q9NPA1 279 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 BLOC1S4Q9NUP1 217 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 STXBP5LQ9Y2K9 1186 aa11.6□□□□□ -0.55
CAPN3-205ENST00000357568 ROBO3Q96MS0 1386 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 ESYT2A0FGR8 921 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 BUB1BO60566 1050 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 PRKCIP41743 596 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 CCNG1P51959 295 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 DRG2P55039 364 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 KLHL30Q0D2K2 578 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 PDIA5Q14554 519 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 CAVIN4Q5BKX8 364 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 BTNL9Q6UXG8 535 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 NEK8Q86SG6 692 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 APLFQ8IW19 511 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 TRIM59Q8IWR1 403 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 LARP4BQ92615 738 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 L3MBTL3Q96JM7 780 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 SPZ1Q9BXG8 430 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 CRNKL1Q9BZJ0 848 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 GANQ9H2C0 597 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 NOP53Q9NZM5 478 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 CNOT7Q9UIV1 285 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 UTP11Q9Y3A2 253 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 NOC2LQ9Y3T9 749 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 A0A087X0T9 212 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 FAM187AA6NFU0 413 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 MYMKA6NI61 221 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 CCDC169A6NNP5 214 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 USP17L21D6R901 530 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 hCG_1984214I3L0E3 225 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 NKRFO15226 690 aaKnown RBP eCLIP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 FAM228BP0C875 321 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 VEGFAP15692 232 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 GNA11P29992 359 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 POU5F1Q01860 360 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 MAP2K1Q02750 393 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 GRB10Q13322 594 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 TRADDQ15628 312 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 MYOCDQ8IZQ8 938 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 ZNF713Q8N859 430 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 ARMC2Q8NEN0 867 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 ATXN2LQ8WWM7 1075 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 FAM212AQ96EL1 285 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 LSM14BQ9BX40 385 aaKnown RBP11.59□□□□□ -0.55
CAPN3-205ENST00000357568 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 NEUROG2Q9H2A3 272 aa11.59□□□□□ -0.55
CAPN3-205ENST00000357568 NEBLO76041 1014 aa11.58□□□□□ -0.56
CAPN3-205ENST00000357568 AGTP01019 485 aa11.58□□□□□ -0.56
CAPN3-205ENST00000357568 CCND1P24385 295 aa11.58□□□□□ -0.56
CAPN3-205ENST00000357568 TMEM119Q4V9L6 283 aa11.58□□□□□ -0.56
CAPN3-205ENST00000357568 HIBCHQ6NVY1 386 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-205ENST00000357568 TCP11Q8WWU5 503 aa11.58□□□□□ -0.56
CAPN3-205ENST00000357568 RAD54LQ92698 747 aa11.58□□□□□ -0.56
CAPN3-205ENST00000357568 NAP1L3Q99457 506 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-205ENST00000357568 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.58□□□□□ -0.56
CAPN3-205ENST00000357568 SAMD15Q9P1V8 674 aa11.58□□□□□ -0.56
CAPN3-205ENST00000357568 CEP104O60308 925 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms